CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCH_Pc12g05270
(
Penicillium rubens
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PCH_Pc12g05270
T277420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01706
M02344_2.00
Neurospora crassa
NNNAWYNNNN
NNNNRWTNNN
PBM
Weirauch et al.(2014)
pTH9662
0.805
0.904
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP80154
Myb
90
134
QSKWSPDEDALIIELRGSGMKWEDISKRLPGRSAISCRLHYQNYL
CAP80154
Myb
137
176
RSEWDEDKKNKLARLYERFKAEMWSKVAEEMAIPWRAAEA
Links
Other
Myb/SANT
family TFs
Other
Penicillium rubens
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017449
Oryza indica
BGIOSGA017449
N
0.000
BRADI2G14372
Brachypodium distachyon
BRADI2G14372
N
0.000
BRADI2G41720
Brachypodium distachyon
BRADI2G41720
N
0.000
F775_03250
Aegilops tauschii
F775_03250
N
0.000
GRMZM2G018048
Zea mays
GRMZM2G018048
N
0.000
GRMZM2G350684
Zea mays
GRMZM2G350684
N
0.000
MLOC_60761
Hordeum vulgare
MLOC_60761
N
0.000
OB05G35500
Oryza brachyantha
OB05G35500
N
0.000
OBART05G28000
Oryza barthii
OBART05G28000
N
0.000
OGLUM05G29460
Oryza glumaepatula
OGLUM05G29460
N
0.000
OLONG_007975
Oryza longistaminata
OLONG_007975
N
0.000
OMERI05G23880
Oryza meridionalis
OMERI05G23880
N
0.000
ONIVA05G29890
Oryza nivara
ONIVA05G29890
N
0.000
OPUNC05G25580
Oryza punctata
OPUNC05G25580
N
0.000
OPUNC05G25600
Oryza punctata
OPUNC05G25600
N
0.000
ORUFI05G29980
Oryza rufipogon
ORUFI05G29980
N
0.000
Pavir.J00429
Panicum virgatum
Pavir.J00429
N
0.000
Pavir.J03231
Panicum virgatum
Pavir.J03231
N
0.000
Si020947m.g
Setaria italica
Si020947m.g
N
0.000
Traes_1DL_7773A9BFB
Triticum aestivum
Traes_1DL_7773A9BFB
N
0.000
Traes_3AL_06889C77D
Triticum aestivum
Traes_3AL_06889C77D
N
0.000
Traes_3DL_FC1A52B36
Triticum aestivum
Traes_3DL_FC1A52B36
N
0.000
TRIUR3_17785
Triticum urartu
TRIUR3_17785
N
0.000
TRIUR3_27363
Triticum urartu
TRIUR3_27363
N
0.000