PGSC0003DMG400023432 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400023432 T277662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.841 0.936
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.841 0.915
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.841 0.915
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.841 0.915
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.823 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400060233 Myb 585 615
PGSC0003DMT400060234 Myb 585 635

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02509 Capronia coronata A1O1_02509 N
A1O3_00914 Capronia epimyces A1O3_00914 N
A1O5_01498 Cladophialophora psammophila A1O5_01498 N
A1O7_08287 Cladophialophora yegresii A1O7_08287 N
ACLA_007650 Aspergillus clavatus CADACLAG00000450 N
AFUA_7G05960 Aspergillus fumigatus CADAFUAG00009660 N
ANIA_06733 Aspergillus nidulans CADANIAG00007526 N
ARB_01120 Arthroderma benhamiae ARB_01120 N
BDDG_08162 Blastomyces dermatitidis BDDG_08162 N
CADAFLAG00000474 Aspergillus flavus CADAFLAG00000474 N
CADANGAG00005435 Aspergillus niger CADANGAG00005435 N
CADAORAG00002457 Aspergillus oryzae CADAORAG00002457 N
CIMG_08163 Coccidioides immitis CIMG_08163 N
CPC735_021860 Coccidioides posadasii CPC735_021860 N
EPUS_02224 Endocarpon pusillum EPUS_02224 N
EURHEDRAFT_512897 Aspergillus ruber EURHEDRAFT_512897 N
fgenesh1_pm.00771_#_78 Aspergillus carbonarius fgenesh1_pm.00771_#_78 N
G647_07244 Cladophialophora carrionii G647_07244 N
H101_04104 Trichophyton interdigitale H101_04104 N
H102_03320 Trichophyton rubrum H102_03320 N
H105_03339 Trichophyton soudanense H105_03339 N
HCBG_04319 Histoplasma capsulatum HCBG_04319 N
HMPREF1120_02238 Exophiala dermatitidis HMPREF1120_02238 N
HMPREF1541_03654 Cyphellophora europaea HMPREF1541_03654 N
HMPREF1541_09227 Cyphellophora europaea HMPREF1541_09227 N
MCYG_02260 Microsporum canis MCYG_02260 N
MCYG_02260 Arthroderma otae MCYG_02260 N
MGYG_07575 Microsporum gypseum MGYG_07575 N
NFIA_027200 Neosartorya fischeri CADNFIAG00002534 N
PABG_00768 Paracoccidioides brasiliensis PABG_00768 N
PDE_02184 Penicillium oxalicum PDE_02184 N
PMAA_049200 Penicillium marneffei PMAA_049200 N
PMAA_049200 Talaromyces marneffei PMAA_049200 N
PV04_08823 Capronia semiimmersa PV04_08823 N
PV05_00997 Exophiala xenobiotica PV05_00997 N
PV06_09822 Exophiala oligosperma PV06_09822 N
PV07_00882 Cladophialophora immunda PV07_00882 N
PV08_08880 Exophiala spinifera PV08_08880 N
PV10_04925 Exophiala mesophila PV10_04925 N
PV11_02484 Exophiala sideris PV11_02484 N
PVAR5_4548 Byssochlamys spectabilis PVAR5_4548 N
TEQG_07260 Trichophyton equinum TEQG_07260 N
TESG_03991 Trichophyton tonsurans TESG_03991 N
TRV_02239 Trichophyton verrucosum TRV_02239 N
TSTA_039140 Talaromyces stipitatus TSTA_039140 N
UREG_02425 Uncinocarpus reesii UREG_02425 N
Z517_05164 Fonsecaea pedrosoi Z517_05164 N
Z518_10852 Rhinocladiella mackenziei Z518_10852 N
Z519_01916 Cladophialophora bantiana Z519_01916 N