POPTR_0014s10680 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0014s10680 T278460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.872 0.968
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.872 0.968
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.872 0.968
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.808 0.871
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.808 0.871
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.687 0.720
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.682 0.731
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.682 0.731
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.682 0.731
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.671 0.667
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.671 0.667
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.665 0.677
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.665 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s10680.1 Myb 14 61
POPTR_0014s10680.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

817 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013832 Calypte anna Aan_R013832 I
AATE014785 Anopheles atroparvus AATE014785 I
ADIR005096 Anopheles dirus ADIR005096 I
AEPI009051 Anopheles epiroticus AEPI009051 I
AFAF016726 Anopheles farauti AFAF016726 I
Afo_R000177 Aptenodytes forsteri Afo_R000177 I
Afo_R007655 Aptenodytes forsteri Afo_R007655 I
AFUN000829 Anopheles funestus AFUN000829 I
Alligator_sinensis_CCG003592.1 Alligator sinensis Alligator_sinensis_CCG003592.1 I
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I
AMEC017008 Anopheles melas AMEC017008 I
AQUA011339 Anopheles quadriannulatus AQUA011339 I
ARNT Anolis carolinensis ENSACAG00000011254 I
ARNT Bos taurus ENSBTAG00000021037 I
ARNT Canis familiaris ENSCAFG00000012149 I
ARNT Choloepus hoffmanni ENSCHOG00000010045 I
arnt Ciona intestinalis ENSCING00000008102 I
ARNT Callithrix jacchus ENSCJAG00000006839 I
ARNT Cavia porcellus ENSCPOG00000014578 I
ARNT Dasypus novemcinctus ENSDNOG00000005093 I
ARNT Equus caballus ENSECAG00000009602 I
ARNT Erinaceus europaeus ENSEEUG00000007500 I
ARNT Echinops telfairi ENSETEG00000001280 I
ARNT Felis catus ENSFCAG00000003644 I
ARNT Homo sapiens ENSG00000143437 D
arnt Gasterosteus aculeatus ENSGACG00000011686 I
ARNT Gallus gallus ENSGALG00000000751 I
ARNT Gorilla gorilla ENSGGOG00000015383 I
ARNT Loxodonta africana ENSLAFG00000011282 I
ARNT Meleagris gallopavo ENSMGAG00000000943 I
ARNT Microcebus murinus ENSMICG00000005872 I
ARNT Myotis lucifugus ENSMLUG00000003502 I
ARNT Macaca mulatta ENSMMUG00000000541 I
ARNT Monodelphis domestica ENSMODG00000018814 I
Arnt Mus musculus ENSMUSG00000015522 D
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I
ARNT Otolemur garnettii ENSOGAG00000004523 I
ARNT Ochotona princeps ENSOPRG00000010374 I
ARNT Oryzias latipes ENSORLG00000010551 I
ARNT Procavia capensis ENSPCAG00000008485 I
ARNT Pan troglodytes ENSPTRG00000001266 I
ARNT Pteropus vampyrus ENSPVAG00000004354 I
Arnt Rattus norvegicus ENSRNOG00000031174 I
ARNT Sorex araneus ENSSARG00000005490 I
ARNT Sus scrofa ENSSSCG00000006646 I
ARNT Taeniopygia guttata ENSTGUG00000004647 I
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I
ARNT Takifugu rubripes ENSTRUG00000014504 I
ARNT Tursiops truncatus ENSTTRG00000007388 I
ARNT Vicugna pacos ENSVPAG00000005439 I
arnt Xenopus tropicalis XB-GENE-855450 I
arnt.L Xenopus laevis XB-GENE-17346408 I
arnt.S Xenopus laevis XB-GENE-866594 I
ARNT2 Anolis carolinensis ENSACAG00000011731 I
ARNT2 Canis familiaris ENSCAFG00000013922 I
ARNT2 Choloepus hoffmanni ENSCHOG00000012285 I
ARNT2 Callithrix jacchus ENSCJAG00000007640 I
ARNT2 Cavia porcellus ENSCPOG00000012997 I
arnt2 Danio rerio ENSDARG00000103697 I
ARNT2 Dasypus novemcinctus ENSDNOG00000046568 I
ARNT2 Equus caballus ENSECAG00000015748 I
ARNT2 Felis catus ENSFCAG00000012936 I
ARNT2 Homo sapiens ENSG00000172379 D
arnt2 Gasterosteus aculeatus ENSGACG00000013947 I
ARNT2 Gallus gallus ENSGALG00000006445 I
ARNT2 Gorilla gorilla ENSGGOG00000012245 I
ARNT2 Loxodonta africana ENSLAFG00000021559 I
ARNT2 Meleagris gallopavo ENSMGAG00000008186 I
ARNT2 Microcebus murinus ENSMICG00000015661 I
ARNT2 Macaca mulatta ENSMMUG00000011566 I
ARNT2 Monodelphis domestica ENSMODG00000019416 I
Arnt2 Mus musculus ENSMUSG00000015709 D
ARNT2 Oryctolagus cuniculus ENSOCUG00000017566 I
ARNT2 Otolemur garnettii ENSOGAG00000011634 I
ARNT2 Pan troglodytes ENSPTRG00000007363 I
ARNT2 Pteropus vampyrus ENSPVAG00000003755 I
Arnt2 Rattus norvegicus ENSRNOG00000013017 D
ARNT2 Sorex araneus ENSSARG00000012144 I
ARNT2 Tupaia belangeri ENSTBEG00000015444 I
ARNT2 Taeniopygia guttata ENSTGUG00000008015 I
arnt2 Takifugu rubripes ENSTRUG00000000793 I
ARNT2 Tursiops truncatus ENSTTRG00000003099 I
arnt2 Xenopus tropicalis XB-GENE-487404 I
arnt2.L Xenopus laevis XB-GENE-17338344 I
arnt2.S Xenopus laevis XB-GENE-487408 I
BGIBMGA003472 Bombyx mori BGIBMGA003472 I
Brh_R012646 Buceros rhinoceros Brh_R012646 I
CLEC002917 Cimex lectularius CLEC002917 I
CLEC012864 Cimex lectularius CLEC012864 I
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I
Cmyd_10021146 Chelonia mydas Cmyd_10021146 I
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I
ENSAMEG00000006241 Ailuropoda melanoleuca ENSAMEG00000006241 I
ENSAMXG00000012473 Astyanax mexicanus ENSAMXG00000012473 I
ENSAMXG00000019978 Astyanax mexicanus ENSAMXG00000019978 I
ENSAPLG00000010837 Anas platyrhynchos ENSAPLG00000010837 I
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I
ENSBTAG00000047587 Bos taurus ENSBTAG00000047587 I
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I
ENSCSAG00000015083 Chlorocebus sabaeus ENSCSAG00000015083 I
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I
ENSDORG00000004181 Dipodomys ordii ENSDORG00000004181 I
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I
ENSFALG00000005800 Ficedula albicollis ENSFALG00000005800 I
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I
ENSLACG00000008884 Latimeria chalumnae ENSLACG00000008884 I
ENSLOCG00000012783 Lepisosteus oculatus ENSLOCG00000012783 I
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I
ENSMEUG00000008354 Macropus eugenii ENSMEUG00000008354 I
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I
ENSMPUG00000015447 Mustela putorius furo ENSMPUG00000015447 I
ENSNLEG00000008951 Nomascus leucogenys ENSNLEG00000008951 I
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I
ENSOANG00000028789 Ornithorhynchus anatinus ENSOANG00000028789 I
ENSOARG00000015391 Ovis aries ENSOARG00000015391 I
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I
ENSONIG00000001978 Oreochromis niloticus ENSONIG00000001978 I
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I
ENSP00000307479 Macaca fascicularis ENSP00000307479 I
ENSP00000307479-D1 Bos grunniens ENSP00000307479-D1 I
ENSP00000351407 Macaca fascicularis ENSP00000351407 I
ENSPANG00000015681 Papio anubis ENSPANG00000015681 I
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I
ENSPFOG00000000603 Poecilia formosa ENSPFOG00000000603 I
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I
ENSPPYG00000006714 Pongo abelii ENSPPYG00000006714 I
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I
ENSPSIG00000010366 Pelodiscus sinensis ENSPSIG00000010366 I
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I
ENSSHAG00000012937 Sarcophilus harrisii ENSSHAG00000012937 I
ENSSSCG00000001781 Sus scrofa ENSSSCG00000001781 I
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I
ENSTNIG00000004348 Tetraodon nigroviridis ENSTNIG00000004348 I
ENSTSYG00000001890 Tarsius syrichta ENSTSYG00000001890 I
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I
GA11313 Drosophila pseudoobscura FBgn0071367 I
GD20825 Drosophila simulans FBgn0192287 I
GE24803 Drosophila yakuba FBgn0241904 I
GF18433 Drosophila ananassae FBgn0095451 I
Gfo_R004222 Geospiza fortis Gfo_R004222 I
Gfo_R011690 Geospiza fortis Gfo_R011690 I
GG17399 Drosophila erecta FBgn0109625 I
GH18221 Drosophila grimshawi FBgn0125689 I
GI10175 Drosophila mojavensis FBgn0132941 I
GJ10876 Drosophila virilis FBgn0198144 I
GK11420 Drosophila willistoni FBgn0213431 I
GL12493 Drosophila persimilis FBgn0150099 I
GM26289 Drosophila sechellia FBgn0181143 I
HHAL008564-PA Halyomorpha halys HHAL008564-PA I
HHAL009348-PA Halyomorpha halys HHAL009348-PA I
HMEL013329 Heliconius melpomene HMEL013329 I
ISCW023999 Ixodes scapularis ISCW023999 I
KGM_04621 Danaus plexippus KGM_04621 I
LCUP007387 Lucilia cuprina LCUP007387 I
LDEC004670 Leptinotarsa decemlineata LDEC004670 I
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I
MCINX011636 Melitaea cinxia MCINX011636 I
MDOA015409 Musca domestica MDOA015409 I
Myotis_brandtii_ARNT2_10004786 Myotis brandtii Myotis_brandtii_ARNT2_10004786 I
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I
NV11924 Nasonia vitripennis NV11924 I
Ogr07219 Ophisaurus gracilis Ogr07219 I
PHUM505970 Pediculus humanus PHUM505970 I
Pvit_04978 Pogona vitticeps Pvit_04978 I
Pvit_13617 Pogona vitticeps Pvit_13617 I
RPRC004351 Rhodnius prolixus RPRC004351 I
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I
SINV17691 Solenopsis invicta SINV17691 I
Tal_R007034 Tyto alba Tal_R007034 I
Tal_R013361 Tyto alba Tal_R013361 I
TC004710 Tribolium castaneum TC004710 I
tgo Drosophila melanogaster FBgn0264075 D