SKUD_176006 (Saccharomyces kudriavzevii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 SKUD_176006 T279944_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REB1
M00063_2.00 		Saccharomyces cerevisiae
RTTACCCG
CGGGTAAY		 PBM
Badis et al.(2008)
REB1_4402 		0.730 0.763
REB1
M07491_2.00 		Saccharomyces cerevisiae
RTTACCCKN
NMGGGTAAY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0363.1 		0.730 0.763
REB1
M07553_2.00 		Saccharomyces cerevisiae
NVTTACCCKVH
DBMGGGTAABN		 ChIP-exo
Rhee et al.(2011)
Reb1_1 		0.730 0.763
REB1
M07554_2.00 		Saccharomyces cerevisiae
YACCACWMCCACWYACCMHMC
GKDKGGTRWGTGGKWGTGGTR		 ChIP-exo
Rhee et al.(2011)
Reb1_2 		0.730 0.763
REB1
M07555_2.00 		Saccharomyces cerevisiae
TYTCACATTCCACTCCAYKSC
GSMRTGGAGTGGAATGTGARA		 ChIP-exo
Rhee et al.(2011)
Reb1_3 		0.730 0.763
REB1
M08593_2.00 		Saccharomyces cerevisiae
RTTACCCGSMHDD
HHDKSCGGGTAAY		 Misc
DeBoer et al.(2011)
YBR049C_907 		0.730 0.763
REB1
M11062_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$REB1_B 		0.730 0.763
REB1
M11063_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$REB1_Q5 		0.730 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42671 Myb 347 391
EJT42671 Myb 399 419
EJT42671 Myb 444 488

Links

Other Myb/SANT family TFs
Other Saccharomyces kudriavzevii TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CANTEDRAFT_122165 Candida tenuis CANTEDRAFT_122165 N
CaO19.2315 Candida albicans CaO19.2315 N
CaO19.9851 Candida albicans CaO19.9851 N
CD36_10310 Candida dubliniensis CD36_10310 N
CORT_0A04250 Candida orthopsilosis CORT_0A04250 N
CPAG_01850 Candida parapsilosis CPAG_01850 N
DEHA2G15026g Debaryomyces hansenii DEHA2G15026g N
fgenesh1_pg.C_chr_2.1000985 Pichia stipitis fgenesh1_pg.C_chr_2.1000985 N
G210_5398 Candida maltosa G210_5398 N
LELG_00392 Lodderomyces elongisporus LELG_00392 N
PICST_30309 Scheffersomyces stipitis PICST_30309 N
SPAPADRAFT_52067 Spathaspora passalidarum SPAPADRAFT_52067 N