TCM_005021 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_005021 T280442_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.899 0.957
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.891 0.935
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.891 0.935
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.854 0.891
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.854 0.891
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.800 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.800 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.800 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.800 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.800 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.767 0.848
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.767 0.848
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.767 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.766 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX95552 Myb 24 69
EOX95553 Myb 24 69
EOX95554 Myb 24 69
EOX95555 Myb 24 69
EOX95556 Myb 24 69
EOX95557 Myb 24 69
EOX95558 Myb 24 69
EOX95559 Myb 24 69
EOX95560 Myb 24 69
EOX95561 Myb 24 69
EOX95562 Myb 24 69
EOX95563 Myb 24 69

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00097g330 Arthrobotrys oligospora AOL_s00097g330 N 0.000
CFIO01_10585 Colletotrichum fioriniae CFIO01_10585 N 0.000
CHGG_05199 Chaetomium globosum CHGG_05199 N 0.000
Cob_10953 Colletotrichum orbiculare Cob_10953 N 0.000
CSUB01_04727 Colletotrichum sublineola CSUB01_04727 N 0.000
F503_05131 Ophiostoma piceae uamh F503_05131 N 0.000
fgenesh1_pg.C_scaffold_44000064 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_44000064 N 0.000
fgenesh1_pm.00153_#_15 Aspergillus carbonarius fgenesh1_pm.00153_#_15 N 0.000
GLRG_03455 Colletotrichum graminicola GLRG_03455 N 0.000
MGG_02408 Magnaporthe oryzae MGG_02408 N 0.000
MYCFIDRAFT_153260 Pseudocercospora fijiensis MYCFIDRAFT_153260 N 0.000