TCM_007242 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_007242 T280455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.839 0.913
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.784 0.848
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.784 0.848
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.784 0.848
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.784 0.848
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.767 0.935
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.723 0.696
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.672 0.783
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX98494 Myb 5 56
EOX98495 Myb 5 56
EOX98496 Myb 5 56

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000028273-D1 Bos grunniens ENSBTAP00000028273-D1 N
ENSCSAG00000006039 Chlorocebus sabaeus ENSCSAG00000006039 N
ENSMPUG00000012333 Mustela putorius furo ENSMPUG00000012333 N
ENSNLEG00000015834 Nomascus leucogenys ENSNLEG00000015834 N
ENSP00000417204 Macaca fascicularis ENSP00000417204 N
ENSPANG00000016527 Papio anubis ENSPANG00000016527 N
ENSPPYG00000007271 Pongo abelii ENSPPYG00000007271 N
ENSSTOG00000021915 Ictidomys tridecemlineatus ENSSTOG00000021915 N
Myotis_brandtii_ZNF48_10014474 Myotis brandtii Myotis_brandtii_ZNF48_10014474 N
Zfp553 Mus musculus ENSMUSG00000045598 N
Zfp553 Dipodomys ordii ENSDORG00000013148 N
ZNF48 Macaca mulatta ENSMMUG00000029159 N
ZNF48 Loxodonta africana ENSLAFG00000008821 N
ZNF48 Homo sapiens ENSG00000180035 N
ZNF48 Oryctolagus cuniculus ENSOCUG00000013651 N
ZNF48 Felis catus ENSFCAG00000028864 N
ZNF48 Procavia capensis ENSPCAG00000009103 N
ZNF48 Pan troglodytes ENSPTRG00000007999 N
Znf48 Rattus norvegicus ENSRNOG00000017837 N
ZNF48 Sus scrofa ENSSSCG00000007801 N
ZNF48 Cavia porcellus ENSCPOG00000001104 N
ZNF48 Tursiops truncatus ENSTTRG00000017273 N
ZNF48 Callithrix jacchus ENSCJAG00000002611 I
ZNF48 Canis familiaris ENSCAFG00000029852 N
ZNF48 Bos taurus ENSBTAG00000031806 N