Cla012350 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla012350 T283225_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012350 Myb 1 36

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00119p00069270 Amborella trichopoda AMTR_s00119p00069270 N 0.826
ATY13 Arabidopsis thaliana AT1G74650 D 0.894
cassava17530.valid.m1 Manihot esculenta cassava17530.valid.m1 N 0.894
Ciclev10020967m.g Citrus clementina Ciclev10020967m.g I 0.894
Eucgr.K02470 Eucalyptus grandis Eucgr.K02470 I 0.888
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.663
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.665
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I 0.882
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.698
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.675
Gorai.013G113000 Gossypium raimondii Gorai.013G113000 I 0.888
MYB28 Arabidopsis thaliana AT5G61420 I 0.674
MYB30 Arabidopsis thaliana AT3G28910 D 0.888
OGLUM11G01380 Oryza glumaepatula OGLUM11G01380 N 0.767
orange1.1g019307m.g Citrus sinensis orange1.1g019307m.g I 0.894
Pavir.Ea03006 Panicum virgatum Pavir.Ea03006 N 0.670
PK07010.1 Cannabis sativa PK07010.1 N 0.668
PK18646.1 Cannabis sativa PK18646.1 N 0.693
Traes_2AL_E2F8D46CE Triticum aestivum Traes_2AL_E2F8D46CE N 0.688
VIT_11s0016g05650 Vitis vinifera VIT_11s0016g05650 N 0.688