Pm013422 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm013422 T283529_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.899 0.957
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.899 0.957
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.899 0.957
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.898 0.936
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.849 0.936
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.840 0.894
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.839 0.894
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.824 0.872
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.824 0.872
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.822 0.872
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.811 0.830
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.798 0.809
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.798 0.809
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.798 0.809
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.779 0.830
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.779 0.830
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.773 0.851
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.702 0.787
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.702 0.787
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.702 0.787
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.699 0.660
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.699 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm013422 Myb 112 159

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

589 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003587 Ailuropoda melanoleuca ENSAMEG00000003587 I 0.000
ENSCPOG00000013045 Cavia porcellus ENSCPOG00000013045 I 0.000
ENSCSAG00000004219 Chlorocebus sabaeus ENSCSAG00000004219 I 0.000
ENSMMUP00000028553 Macaca fascicularis ENSMMUP00000028553 I 0.000
ENSNLEG00000003048 Nomascus leucogenys ENSNLEG00000003048 I 0.000
ENSPANG00000004843 Papio anubis ENSPANG00000004843 I 0.000
ENSPPYG00000010535 Pongo abelii ENSPPYG00000010535 I 0.000
ENSSSCG00000026429 Sus scrofa ENSSSCG00000026429 I 0.000
ENSSTOG00000020595 Ictidomys tridecemlineatus ENSSTOG00000020595 I 0.000
Myotis_brandtii_ZFP14_10004810 Myotis brandtii Myotis_brandtii_ZFP14_10004810 I 0.000
ZFP14 Pan troglodytes ENSPTRG00000010893 I 0.000
ZFP14 Canis familiaris ENSCAFG00000029949 I 0.000
ZFP14 Choloepus hoffmanni ENSCHOG00000002471 I 0.000
ZFP14 Vicugna pacos ENSVPAG00000008943 I 0.000
ZFP14 Tupaia belangeri ENSTBEG00000010678 I 0.000
ZFP14 Callithrix jacchus ENSCJAG00000033866 I 0.000
ZFP14 Dasypus novemcinctus ENSDNOG00000005338 I 0.000
ZFP14 Sorex araneus ENSSARG00000003380 I 0.000
ZFP14 Pteropus vampyrus ENSPVAG00000003062 I 0.000
ZFP14 Gorilla gorilla ENSGGOG00000013664 I 0.000
ZFP14 Equus caballus ENSECAG00000021751 I 0.000
ZFP14 Echinops telfairi ENSETEG00000007463 I 0.000
ZFP14 Otolemur garnettii ENSOGAG00000008384 I 0.000
ZFP14 Oryctolagus cuniculus ENSOCUG00000017838 I 0.000
ZFP14 Homo sapiens ENSG00000142065 D 0.000
Zfp14 Mus musculus ENSMUSG00000053985 I 0.000
ZFP14 Macaca mulatta ENSMMUG00000021686 I 0.000
ZFP14 Loxodonta africana ENSLAFG00000013621 I 0.000
Zfp82 Rattus norvegicus ENSRNOG00000030932 I 0.000
ZFP82 Microcebus murinus ENSMICG00000006314 I 0.000