Pm015303 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm015303 T283541_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.667 0.699
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.667 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm015303 Myb 14 61
Pm015303 Myb 67 112

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025973 Oryza indica BGIOSGA025973 N
BRADI1G24140 Brachypodium distachyon BRADI1G24140 N
GRMZM2G081782 Zea mays GRMZM2G081782 N
LPERR07G16580 Leersia perrieri LPERR07G16580 N
MLOC_52196 Hordeum vulgare MLOC_52196 N
OBART07G19250 Oryza barthii OBART07G19250 N
OGLUM07G19030 Oryza glumaepatula OGLUM07G19030 N
OLONG_002240 Oryza longistaminata OLONG_002240 N
ONIVA07G17600 Oryza nivara ONIVA07G17600 N
ORGLA07G0246500 Oryza glaberrima ORGLA07G0246500 N
ORUFI07G20030 Oryza rufipogon ORUFI07G20030 N
OS07G0569700 Oryza sativa OS07G0569700 N
Pavir.Ba00594 Panicum virgatum Pavir.Ba00594 N
Pavir.J03938 Panicum virgatum Pavir.J03938 N
Sb02g036840 Sorghum bicolor Sb02g036840 N
Si030697m.g Setaria italica Si030697m.g N
Traes_2AS_E9A1F35CB Triticum aestivum Traes_2AS_E9A1F35CB N
Traes_2DS_2CE71025C Triticum aestivum Traes_2DS_2CE71025C N
TRIUR3_28482 Triticum urartu TRIUR3_28482 N