Pm018821 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm018821 T283567_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.831 0.936
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.831 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.831 0.936
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.823 0.915
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.823 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018821 Myb 584 634

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB008506 Anopheles albimanus AALB008506 N 0.000
AATE020607 Anopheles atroparvus AATE020607 N 0.000
ACHR000336 Anopheles christyi ACHR000336 N 0.000
ADIR000252 Anopheles dirus ADIR000252 N 0.000
AFAF009666 Anopheles farauti AFAF009666 N 0.000
AMAM010737 Anopheles maculatus AMAM010737 N 0.000
AMIN009016 Anopheles minimus AMIN009016 N 0.000
ASTEI10329 Anopheles stephensi ASTEI10329 N 0.000
chn Drosophila melanogaster FBgn0015371 N 0.000
GD11098 Drosophila simulans FBgn0182855 N 0.000
GG20498 Drosophila erecta FBgn0112688 N 0.000
GK19701 Drosophila willistoni FBgn0221699 N 0.000
GM21590 Drosophila sechellia FBgn0176470 N 0.000
MDOA006683 Musca domestica MDOA006683 N 0.000