28226.m000839 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 28226.m000839 T283725_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRMZM2G005066
M11056_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$C1_Q2 		0.734 0.731
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.684 0.688
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.678 0.720
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.667 0.667
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.667 0.667
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.665 0.720
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.664 0.677
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.664 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
28226.m000839 Myb 14 61
28226.m000839 Myb 67 112

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

599 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_191870 Agaricus bisporus AGABI2DRAFT_191870 N
BGHDH14_bgh05696 Blumeria graminis BGHDH14_bgh05696 N
BOTBODRAFT_92498 Botryobasidium botryosum BOTBODRAFT_92498 I
CNA04400 Cryptococcus neoformans CNA04400 N
CY34DRAFT_797697 Suillus luteus CY34DRAFT_797697 N
DACRYDRAFT_39315 Dacryopinax sp DACRYDRAFT_39315 N
estExt_fgenesh3_kg.C_40166 Heterobasidion annosum estExt_fgenesh3_kg.C_40166 N
EV44_g6044 Erysiphe necator EV44_g6044 N
fgenesh1_pg.C_scaffold_2000749 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000749 N
GALMADRAFT_133154 Galerina marginata GALMADRAFT_133154 N
GLOTRDRAFT_136174 Gloeophyllum trabeum GLOTRDRAFT_136174 N
GSTUM_00007803001 Tuber melanosporum GSTUM_00007803001 N
HETIRDRAFT_313274 Heterobasidion irregulare HETIRDRAFT_313274 N
JAAARDRAFT_145306 Jaapia argillacea JAAARDRAFT_145306 N
L804_02024 Cryptococcus gattii L804_02024 N
M407DRAFT_66269 Tulasnella calospora M407DRAFT_66269 N
M413DRAFT_441255 Hebeloma cylindrosporum M413DRAFT_441255 N
MBM_00167 Marssonina brunnea MBM_00167 N
Moror_7350 Moniliophthora roreri Moror_7350 N
PAXRUDRAFT_831153 Paxillus rubicundulus PAXRUDRAFT_831153 N
PHACADRAFT_249271 Phanerochaete carnosa PHACADRAFT_249271 N
PHLGIDRAFT_221070 Phlebiopsis gigantea PHLGIDRAFT_221070 N
PILCRDRAFT_148646 Piloderma croceum PILCRDRAFT_148646 N
SCLCIDRAFT_138221 Scleroderma citrinum SCLCIDRAFT_138221 N
SERLA73DRAFT_177482 Serpula lacrymans SERLA73DRAFT_177482 N