cassava22618.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava22618.valid.m1 T284081_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.891 0.957
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.891 0.957
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.891 0.957
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.870 0.915
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.789 0.766
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.789 0.766
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.789 0.766
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.789 0.766
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.750 0.809
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.750 0.809
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.729 0.745
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.729 0.745
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.729 0.745
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.719 0.723
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.719 0.723
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.719 0.723
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.719 0.723
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.681 0.745
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.681 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22618.valid.m1 Myb 48 99

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

797 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10009121 Chelonia mydas Cmyd_10009121 N
ENSAMEG00000007185 Ailuropoda melanoleuca ENSAMEG00000007185 N
ENSAMXG00000006287 Astyanax mexicanus ENSAMXG00000006287 N
ENSCSAG00000015620 Chlorocebus sabaeus ENSCSAG00000015620 N
ENSFALG00000010297 Ficedula albicollis ENSFALG00000010297 N
ENSGMOG00000007538 Gadus morhua ENSGMOG00000007538 N
ENSLACG00000013704 Latimeria chalumnae ENSLACG00000013704 N
ENSLOCG00000011104 Lepisosteus oculatus ENSLOCG00000011104 N
ENSMEUG00000015869 Macropus eugenii ENSMEUG00000015869 N
ENSMPUG00000014399 Mustela putorius furo ENSMPUG00000014399 N
ENSNLEG00000004555 Nomascus leucogenys ENSNLEG00000004555 N
ENSOARG00000005075 Ovis aries ENSOARG00000005075 N
ENSONIG00000015237 Oreochromis niloticus ENSONIG00000015237 N
ENSP00000313158 Macaca fascicularis ENSP00000313158 N
ENSP00000313158-D1 Bos grunniens ENSP00000313158-D1 N
ENSPANG00000023914 Papio anubis ENSPANG00000023914 N
ENSPFOG00000007607 Poecilia formosa ENSPFOG00000007607 N
ENSPPYG00000015544 Pongo abelii ENSPPYG00000015544 N
ENSPSIG00000014530 Pelodiscus sinensis ENSPSIG00000014530 N
ENSSHAG00000004351 Sarcophilus harrisii ENSSHAG00000004351 N
ENSSTOG00000029102 Ictidomys tridecemlineatus ENSSTOG00000029102 N
ENSXMAG00000016095 Xiphophorus maculatus ENSXMAG00000016095 N
Myotis_brandtii_ZNF366_10035915 Myotis brandtii Myotis_brandtii_ZNF366_10035915 N
Ogr16419 Ophisaurus gracilis Ogr16419 N
Pvit_17551 Pogona vitticeps Pvit_17551 N
Zfp366 Dipodomys ordii ENSDORG00000000338 N
Zfp366 Mus musculus ENSMUSG00000050919 N
Zfp366 Rattus norvegicus ENSRNOG00000017249 N
ZNF366 Pteropus vampyrus ENSPVAG00000010937 N
znf366 Xenopus tropicalis XB-GENE-6464910 N
ZNF366 Sorex araneus ENSSARG00000010412 N
ZNF366 Sus scrofa ENSSSCG00000016976 N
ZNF366 Taeniopygia guttata ENSTGUG00000005717 N
znf366 Tetraodon nigroviridis ENSTNIG00000016682 N
znf366 Takifugu rubripes ENSTRUG00000015639 N
ZNF366 Tursiops truncatus ENSTTRG00000011858 N
ZNF366 Bos taurus ENSBTAG00000020601 N
ZNF366 Equus caballus ENSECAG00000006723 N
ZNF366 Cavia porcellus ENSCPOG00000007542 N
ZNF366 Felis catus ENSFCAG00000005456 N
ZNF366 Homo sapiens ENSG00000178175 N
znf366 Gasterosteus aculeatus ENSGACG00000006566 N
ZNF366 Gallus gallus ENSGALG00000015008 N
ZNF366 Gorilla gorilla ENSGGOG00000004981 N
ZNF366 Dasypus novemcinctus ENSDNOG00000046166 N
ZNF366 Loxodonta africana ENSLAFG00000030138 N
znf366 Danio rerio ENSDARG00000040116 N
ZNF366 Pan troglodytes ENSPTRG00000016969 N
ZNF366 Monodelphis domestica ENSMODG00000001702 N
ZNF366 Callithrix jacchus ENSCJAG00000016387 N
ZNF366 Canis familiaris ENSCAFG00000007986 N
ZNF366 Ornithorhynchus anatinus ENSOANG00000015788 N
ZNF366 Anolis carolinensis ENSACAG00000009713 N
ZNF366 Oryctolagus cuniculus ENSOCUG00000004571 N
ZNF366 Otolemur garnettii ENSOGAG00000008393 N
znf366 Oryzias latipes ENSORLG00000003805 N