cassava9078.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava9078.m1 T284341_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.689 0.937
MYB_AVIMB
M11068_2.00 		Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB		 Transfac
Matys et al.(2006)
V$VMYB_01 		0.685 0.694
MYB_AVIMB
M11069_2.00 		Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV		 Transfac
Matys et al.(2006)
V$VMYB_02 		0.685 0.694
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.671 0.892
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.671 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava9078.m1 Myb 1 19
cassava9078.m1 Myb 25 71
cassava9078.m1 Myb 77 121

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000489 Calypte anna Aan_R000489 N
Afo_R015331 Aptenodytes forsteri Afo_R015331 N
Alligator_sinensis_CCG002326.1 Alligator sinensis Alligator_sinensis_CCG002326.1 N
Brh_R003353 Buceros rhinoceros Brh_R003353 N
CGI_10017105 Crassostrea gigas CGI_10017105 N
DMTF1 Macaca mulatta ENSMMUG00000010781 N
DMTF1 Anolis carolinensis ENSACAG00000001448 N
DMTF1 Monodelphis domestica ENSMODG00000016953 N
Dmtf1 Mus musculus ENSMUSG00000042508 N
DMTF1 Ornithorhynchus anatinus ENSOANG00000015391 N
DMTF1 Oryctolagus cuniculus ENSOCUG00000009179 N
DMTF1 Otolemur garnettii ENSOGAG00000000022 N
DMTF1 Procavia capensis ENSPCAG00000014639 N
DMTF1 Pan troglodytes ENSPTRG00000019364 N
DMTF1 Pteropus vampyrus ENSPVAG00000007410 N
Dmtf1 Rattus norvegicus ENSRNOG00000005908 N
DMTF1 Sorex araneus ENSSARG00000002410 N
DMTF1 Sus scrofa ENSSSCG00000015393 N
DMTF1 Taeniopygia guttata ENSTGUG00000002365 N
dmtf1 Tetraodon nigroviridis ENSTNIG00000018722 N
DMTF1 Tursiops truncatus ENSTTRG00000006785 N
DMTF1 Vicugna pacos ENSVPAG00000009890 N
DMTF1 Meleagris gallopavo ENSMGAG00000005151 N
DMTF1 Bos taurus ENSBTAG00000020878 N
DMTF1 Canis familiaris ENSCAFG00000001819 N
DMTF1 Callithrix jacchus ENSCJAG00000014730 N
DMTF1 Cavia porcellus ENSCPOG00000002780 N
dmtf1 Danio rerio ENSDARG00000025824 N
DMTF1 Myotis lucifugus ENSMLUG00000017083 N
DMTF1 Equus caballus ENSECAG00000020746 N
DMTF1 Erinaceus europaeus ENSEEUG00000012844 N
DMTF1 Echinops telfairi ENSETEG00000018444 N
DMTF1 Felis catus ENSFCAG00000013756 N
DMTF1 Loxodonta africana ENSLAFG00000004637 N
DMTF1 Homo sapiens ENSG00000135164 N
DMTF1 Gorilla gorilla ENSGGOG00000002781 N
ENSAMEG00000000861 Ailuropoda melanoleuca ENSAMEG00000000861 N
ENSAPLG00000009042 Anas platyrhynchos ENSAPLG00000009042 N
ENSCSAG00000012356 Chlorocebus sabaeus ENSCSAG00000012356 N
ENSDORG00000010983 Dipodomys ordii ENSDORG00000010983 N
ENSFALG00000001933 Ficedula albicollis ENSFALG00000001933 N
ENSGALG00000006628 Gallus gallus ENSGALG00000006628 N
ENSLACG00000013017 Latimeria chalumnae ENSLACG00000013017 N
ENSMPUG00000018305 Mustela putorius furo ENSMPUG00000018305 N
ENSNLEG00000014921 Nomascus leucogenys ENSNLEG00000014921 N
ENSOARG00000014574 Ovis aries ENSOARG00000014574 N
ENSONIG00000009949 Oreochromis niloticus ENSONIG00000009949 N
ENSP00000332171 Macaca fascicularis ENSP00000332171 N
ENSPANG00000011083 Papio anubis ENSPANG00000011083 N
ENSPMAG00000004094 Petromyzon marinus ENSPMAG00000004094 N
ENSPPYG00000017849 Pongo abelii ENSPPYG00000017849 N
ENSPSIG00000016443 Pelodiscus sinensis ENSPSIG00000016443 N
ENSSHAG00000018587 Sarcophilus harrisii ENSSHAG00000018587 N
ENSSTOG00000010351 Ictidomys tridecemlineatus ENSSTOG00000010351 N
Gfo_R011500 Geospiza fortis Gfo_R011500 N
Myotis_brandtii_DMTF1_10006608 Myotis brandtii Myotis_brandtii_DMTF1_10006608 N
NEMVEDRAFT_v1g22981 Nematostella vectensis NEMVEDRAFT_v1g22981 N
Ogr14649 Ophisaurus gracilis Ogr14649 N
Pvit_19395 Pogona vitticeps Pvit_19395 N
Sakowv30027682m.g Saccoglossus kowalevskii Sakowv30027682m.g N
SMAR006666 Strigamia maritima SMAR006666 N
Tal_R002829 Tyto alba Tal_R002829 N
XP_002935299 Xenopus tropicalis XP_002935299 N