Cucsa.322050 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.322050 T284524_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.909 1.000
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.909 1.000
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.875 0.957
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.875 0.957
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.786 0.915
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.322050.1 Myb 181 232
Cucsa.322050.2 Myb 181 232

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI70264 Xenopus laevis AAI70264 N
Cflo_03590--XP_394358.3_APIME Camponotus floridanus Cflo_03590--XP_394358.3_APIME N
ENSAMEG00000014764 Ailuropoda melanoleuca ENSAMEG00000014764 N
ENSAMXG00000001873 Astyanax mexicanus ENSAMXG00000001873 N
ENSAMXG00000002473 Astyanax mexicanus ENSAMXG00000002473 N
ENSAPLG00000016052 Anas platyrhynchos ENSAPLG00000016052 N
ENSBTAP00000038860-D1 Bos grunniens ENSBTAP00000038860-D1 N
ENSLOCG00000017216 Lepisosteus oculatus ENSLOCG00000017216 N
ENSMMUP00000012198 Macaca fascicularis ENSMMUP00000012198 N
ENSMPUG00000008741 Mustela putorius furo ENSMPUG00000008741 N
ENSNLEG00000008466 Nomascus leucogenys ENSNLEG00000008466 N
ENSNLEG00000010244 Nomascus leucogenys ENSNLEG00000010244 N
ENSOANG00000009861 Ornithorhynchus anatinus ENSOANG00000009861 N
ENSONIG00000000499 Oreochromis niloticus ENSONIG00000000499 N
ENSONIG00000018694 Oreochromis niloticus ENSONIG00000018694 N
ENSPANG00000005639 Papio anubis ENSPANG00000005639 N
ENSPFOG00000002613 Poecilia formosa ENSPFOG00000002613 N
ENSPFOG00000017045 Poecilia formosa ENSPFOG00000017045 N
ENSPPYG00000012686 Pongo abelii ENSPPYG00000012686 N
ENSPSIG00000005126 Pelodiscus sinensis ENSPSIG00000005126 N
ENSSHAG00000015142 Sarcophilus harrisii ENSSHAG00000015142 N
ENSSTOG00000001345 Ictidomys tridecemlineatus ENSSTOG00000001345 N
ENSTNIG00000004354 Tetraodon nigroviridis ENSTNIG00000004354 N
ENSXMAG00000002367 Xiphophorus maculatus ENSXMAG00000002367 N
GB48919 Apis mellifera GB48919 N
L798_00492 Zootermopsis nevadensis L798_00492 N
Myt1 Rattus norvegicus ENSRNOG00000017346 N
MYT1 Pteropus vampyrus ENSPVAG00000017398 N
MYT1 Takifugu rubripes ENSTRUG00000002124 N
MYT1 Anolis carolinensis ENSACAG00000006249 N
MYT1 Canis familiaris ENSCAFG00000013222 N
myt1.S Xenopus laevis XB-GENE-1009978 N
myt1a Oryzias latipes ENSORLG00000020139 N
myt1b Oryzias latipes ENSORLG00000002252 N
myt1b Tetraodon nigroviridis ENSTNIG00000003105 N
MYT1L Felis catus ENSFCAG00000013984 N
MYT1L Anolis carolinensis ENSACAG00000005667 N
MYT1L Canis familiaris ENSCAFG00000003240 N
MYT1L Callithrix jacchus ENSCJAG00000007286 N
MYT1L Cavia porcellus ENSCPOG00000013246 N
MYT1L Equus caballus ENSECAG00000014657 N
MYT1L Tursiops truncatus ENSTTRG00000008589 N
MYT1L Takifugu rubripes ENSTRUG00000003414 N
MYT1L Erinaceus europaeus ENSEEUG00000013615 N
MYT1L Oryctolagus cuniculus ENSOCUG00000016764 N
MYT1L Homo sapiens ENSG00000186487 I
MYT1L Sus scrofa ENSSSCG00000029334 N
MYT1L Sorex araneus ENSSARG00000012319 N
MYT1L Gorilla gorilla ENSGGOG00000026335 N
Myt1l Mus musculus ENSMUSG00000061911 N
Myt1l Rattus norvegicus ENSRNOG00000004269 N
MYT1L Loxodonta africana ENSLAFG00000002751 N
MYT1L Procavia capensis ENSPCAG00000015124 N
MYT1L Pan troglodytes ENSPTRG00000011611 N
MYT1L Meleagris gallopavo ENSMGAG00000013972 N
MYT1L Monodelphis domestica ENSMODG00000014378 N
MYT1L Myotis lucifugus ENSMLUG00000012642 N
MYT1L Macaca mulatta ENSMMUG00000009310 I
myt1la Gasterosteus aculeatus ENSGACG00000011952 N
myt1la Oryzias latipes ENSORLG00000018130 N
myt1la Danio rerio ENSDARG00000008209 N
myt1la Takifugu rubripes ENSTRUG00000015790 N
myt1la Tetraodon nigroviridis ENSTNIG00000010716 N
Ogr14932 Ophisaurus gracilis Ogr14932 N
Sakowv30043989m.g Saccoglossus kowalevskii Sakowv30043989m.g N
ST18 Tetraodon nigroviridis ENSTNIG00000008501 N
XP_002936343 Xenopus tropicalis XP_002936343 N
XP_002942428 Xenopus tropicalis XP_002942428 N