CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

e_gw1.6.239.1 *(Physcomitrella patens)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	e_gw1.6.239.1	T284640_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.694	0.753
MYB4 M02303_2.00	Arabidopsis thaliana	YACCWACY	RGTWGGTR	PBM Weirauch et al.(2014) pTH7075	0.688	0.742
MYB4 M07115_2.00	Arabidopsis thaliana	NYYACCWAMHWHNDD	HHNDWDKTWGGTRRN	Dap-seq OMalley et al.(2016) MYB4_col200_a	0.688	0.742
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.662	0.731
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.662	0.731
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
e_gw1.6.239.1	Myb	15	62	KGPWTEAEDTTLSAYIKAHGEGNWRLLPKCAGLSRCGKSCRLRWLNYL
e_gw1.6.239.1	Myb	68	113	KGKFSWDEEDLIVTLHALLGNRWSLIAGRIPGRTDNEIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Physcomitrella patens* TFs