Cagra.0542s0036 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.0542s0036 T285969_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.718 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0542s0036.1.p Myb 14 61
Cagra.0542s0036.1.p Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCOI01481000 Haemonchus contortus HCOI01481000 N
HPLM_0000721301 Haemonchus placei HPLM_0000721301 N