Gorai.013G088400 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G088400 T287813_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.738 0.860
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.735 0.742
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.735 0.742
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.703 0.774
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.703 0.763
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.703 0.763
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.678 0.731
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.662 0.763
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.662 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G088400.1 Myb 12 59
Gorai.013G088400.1 Myb 65 110

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_03060 Ancylostoma ceylanicum ANCCEY_03060 I
ANCDUO_00781 Ancylostoma duodenale ANCDUO_00781 I
BGLB006195 Biomphalaria glabrata BGLB006195 N
DICVIV_13201 Dictyocaulus viviparus DICVIV_13201 N
ENSEEUG00000003019 Erinaceus europaeus ENSEEUG00000003019 N
ENSMICG00000014969 Microcebus murinus ENSMICG00000014969 N
ENSOANG00000004408 Ornithorhynchus anatinus ENSOANG00000004408 N
EVEC_0000826501 Enterobius vermicularis EVEC_0000826501 N
GPUH_0000819601 Gongylonema pulchrum GPUH_0000819601 N
HHEX Echinops telfairi ENSETEG00000009524 N
L893_g8818 Steinernema glaseri L893_g8818 N
NECAME_13601 Necator americanus NECAME_13601 N
OESDEN_00240 Oesophagostomum dentatum OESDEN_00240 N
TCNE_0000690601 Toxocara canis TCNE_0000690601 N