Lus10002704.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10002704.g T287868_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.839 0.936
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.839 0.936
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.831 0.915
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.831 0.915
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.821 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002704 Myb 585 635

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_148181 Bipolaris maydis COCC4DRAFT_148181 N 0.000
COCCADRAFT_91226 Bipolaris zeicola COCCADRAFT_91226 N 0.000
COCMIDRAFT_93104 Bipolaris oryzae COCMIDRAFT_93104 N 0.000
COCSADRAFT_33739 Bipolaris sorokiniana COCSADRAFT_33739 N 0.000
COCVIDRAFT_40633 Bipolaris victoriae COCVIDRAFT_40633 N 0.000
PMAA_047890 Talaromyces marneffei PMAA_047890 N 0.000
PMAA_047890 Penicillium marneffei PMAA_047890 N 0.000
PTRG_03263 Pyrenophora triticirepentis PTRG_03263 N 0.000
PTT_18442 Pyrenophora teres PTT_18442 N 0.000
SETTUDRAFT_167635 Setosphaeria turcica SETTUDRAFT_167635 N 0.000
V565_151110 Rhizoctonia solani V565_151110 N 0.000