Lus10031326.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10031326.g T288134_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB52
M00871_2.00 		Arabidopsis thaliana
NNNAMCNDNN
NNHNGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB52 		0.801 0.871
MYB52
M07007_2.00 		Arabidopsis thaliana
TAACGGTNHHD
HDDNACCGTTA		 Dap-seq
OMalley et al.(2016)
MYB52_col_a 		0.801 0.871
MYB105
M07031_2.00 		Arabidopsis thaliana
TAACGGTWWHDDW
WHHDWWACCGTTA		 Dap-seq
OMalley et al.(2016)
MYB105_col_a 		0.709 0.785
MYB105
M07032_2.00 		Arabidopsis thaliana
NNDWHDHTAACGGWWWH
DWWWCCGTTADHDWHNN		 Dap-seq
OMalley et al.(2016)
MYB105_colamp_a 		0.709 0.785
MYB56
M07130_2.00 		Arabidopsis thaliana
DDHNHTAACKGWHWH
DWDWCMGTTADNDHH		 Dap-seq
OMalley et al.(2016)
MYB56_col_a 		0.690 0.731
MYB56
M07131_2.00 		Arabidopsis thaliana
DNNHTAACGGWHWHD
HDWDWCCGTTADNNH		 Dap-seq
OMalley et al.(2016)
MYB56_colamp_a 		0.690 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10031326 Myb 4 50
Lus10031326 Myb 56 101

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

375 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_00886 Beauveria bassiana BBA_00886 N
CCM_02835 Cordyceps militaris CCM_02835 N
e_gw1.43.159.1 Nectria haematococca e_gw1.43.159.1 N
FFUJ_03786 Fusarium fujikuroi FFUJ_03786 N
FGRRES_16424 Fusarium graminearum FGRRES_16424 N
FOXG_05661 Fusarium oxysporum FOXG_05661 N
FPSE_04048 Fusarium pseudograminearum FPSE_04048 N
FVEG_03514 Fusarium verticillioides FVEG_03514 N
GLRG_11832 Colletotrichum graminicola GLRG_11832 N
MAC_05468 Metarhizium acridum MAC_05468 N
MAJ_05893 Metarhizium majus MAJ_05893 N
MAM_07435 Metarhizium album MAM_07435 N
MANI_022807 Metarhizium anisopliae MANI_022807 N
MBR_00130 Metarhizium brunneum MBR_00130 N
MGU_09467 Metarhizium guizhouense MGU_09467 N
NechaG49678 Fusarium solani NechaG49678 N
PFICI_14032 Pestalotiopsis fici PFICI_14032 N
S40285_07528 Stachybotrys chlorohalonata S40285_07528 N
S40288_02302 Stachybotrys chartarum S40288_02302 N
SAPIO_CDS9353 Scedosporium apiospermum SAPIO_CDS9353 N
TRIATDRAFT_214226 Trichoderma atroviride TRIATDRAFT_214226 N
TRIVIDRAFT_30358 Trichoderma virens TRIVIDRAFT_30358 I
UV8b_2110 Ustilaginoidea virens UV8b_2110 N
X797_002485 Metarhizium robertsii X797_002485 N