Lus10032764.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10032764.g T288147_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.727 0.796
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.727 0.785
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.727 0.785
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.723 0.796
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.716 0.785
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.716 0.785
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.716 0.785
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.705 0.785
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.674 0.774
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.674 0.774
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.674 0.774
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.674 0.774
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.674 0.774
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.666 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10032764 Myb 38 84
Lus10032764 Myb 90 135

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI011200 Anopheles epiroticus AEPI011200 N
AMEM010335 Anopheles merus AMEM010335 N
BGLB002715 Biomphalaria glabrata BGLB002715 N
CG43689 Drosophila melanogaster FBgn0263772 I
Cmyd_10017545 Chelonia mydas Cmyd_10017545 N
CPIJ011292 Culex quinquefasciatus CPIJ011292 N
CpipJ_CPIJ011292 Culex pipiens CpipJ_CPIJ011292 N
DAPPUDRAFT_241731 Daphnia pulex DAPPUDRAFT_241731 N
ENSPMAG00000002519 Petromyzon marinus ENSPMAG00000002519 N
GA24131 Drosophila pseudoobscura FBgn0245530 N
GE16325 Drosophila yakuba FBgn0233857 N
GF20773 Drosophila ananassae FBgn0097779 N
GH24141 Drosophila grimshawi FBgn0131597 N
GJ17015 Drosophila virilis FBgn0204192 N
GK10260 Drosophila willistoni FBgn0212275 N
GM12320 Drosophila sechellia FBgn0167257 N
MDOA006645 Musca domestica MDOA006645 N
Ogr11018 Ophisaurus gracilis Ogr11018 N
Tal_R003541 Tyto alba Tal_R003541 N