MDP0000894463 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000894463 T288740_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.731 0.796
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.710 0.774
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.710 0.774
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.710 0.774
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.708 0.796
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.708 0.796
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.708 0.796
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.705 0.753
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.683 0.785
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.683 0.785
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.683 0.785
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.683 0.785
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.683 0.785
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.666 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000894463 Myb 34 80
MDP0000894463 Myb 86 131

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
E4F1 Bos taurus ENSBTAG00000009961 I
E4F1 Tursiops truncatus ENSTTRG00000008208 I
E4F1 Sus scrofa ENSSSCG00000008047 I
E4f1 Rattus norvegicus ENSRNOG00000009224 I
E4F1 Pteropus vampyrus ENSPVAG00000005098 I
E4F1 Procavia capensis ENSPCAG00000004337 I
E4F1 Ochotona princeps ENSOPRG00000002573 I
E4F1 Otolemur garnettii ENSOGAG00000006594 I
E4F1 Oryctolagus cuniculus ENSOCUG00000025484 I
E4f1 Mus musculus ENSMUSG00000024137 D
E4F1 Macaca mulatta ENSMMUG00000019235 I
E4F1 Myotis lucifugus ENSMLUG00000016786 I
E4F1 Loxodonta africana ENSLAFG00000000725 I
E4F1 Callithrix jacchus ENSCJAG00000015000 I
E4F1 Cavia porcellus ENSCPOG00000002052 I
E4F1 Dasypus novemcinctus ENSDNOG00000016503 I
E4f1 Dipodomys ordii ENSDORG00000001751 I
E4F1 Equus caballus ENSECAG00000008036 I
E4F1 Homo sapiens ENSG00000167967 D
E4F1 Gorilla gorilla ENSGGOG00000014241 I
E4F1 Microcebus murinus ENSMICG00000005892 I
ENSAMEG00000017837 Ailuropoda melanoleuca ENSAMEG00000017837 I
ENSCSAG00000010850 Chlorocebus sabaeus ENSCSAG00000010850 I
ENSMPUG00000015378 Mustela putorius furo ENSMPUG00000015378 I
ENSOARG00000017910 Ovis aries ENSOARG00000017910 I
ENSP00000301727 Macaca fascicularis ENSP00000301727 I
ENSP00000301727-D1 Bos grunniens ENSP00000301727-D1 I
ENSPANG00000017016 Papio anubis ENSPANG00000017016 I
ENSSTOG00000013171 Ictidomys tridecemlineatus ENSSTOG00000013171 I
Myotis_brandtii_E4f1_10005619 Myotis brandtii Myotis_brandtii_E4f1_10005619 I