CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

orange1.1g024441m.g *(Citrus sinensis)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	orange1.1g024441m.g	T288850_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK21166.1 M01281_2.00	Cannabis sativa	HACCWAMY	RKTWGGTD	PBM Lambert et al.(2019) pTH11255	0.819	0.914
MYB99 M07151_2.00	Arabidopsis thaliana	NYYYACCWAMYHH	DDRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB99_col_a	0.760	0.817
MYB99 M07152_2.00	Arabidopsis thaliana	YHYACCTAMYH	DRKTAGGTRDR	Dap-seq OMalley et al.(2016) MYB99_colamp_a	0.760	0.817
MYB43 M07127_2.00	Arabidopsis thaliana	NYYYACCWAMYWH	DWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB43_col_a	0.758	0.860
MYB83 M01073_2.00	Arabidopsis thaliana	YACCHACC	GGTDGGTR	PBM Sullivan et al.(2014) pTH7140	0.675	0.634
MYB83 M07066_2.00	Arabidopsis thaliana	YCACCAACHNH	DNDGTTGGTGR	Dap-seq OMalley et al.(2016) MYB83_col_a	0.675	0.634
MYB83 M07067_2.00	Arabidopsis thaliana	NCACCWAMCDNHNNN	NNNDNHGKTWGGTGN	Dap-seq OMalley et al.(2016) MYB83_colamp_a	0.675	0.634
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
orange1.1g024441m	Myb	14	61	KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL
orange1.1g024441m	Myb	67	112	RGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHI

Links
Other Myb/SANT family TFs
Other *Citrus sinensis* TFs