Pavir.Ib04118 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ib04118 T289294_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib04118.1.p Myb 5 57
Pavir.Ib04118.4.p Myb 5 57
Pavir.Ib04118.5.p Myb 5 57

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I 0.669
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.688
Ca_08043 Cicer arietinum Ca_08043 I 0.752
Cla006547 Citrullus lanatus Cla006547 I 0.669
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.669
Genemark1.2391_g Coccomyxa subellipsoidea C169 Genemark1.2391_g N 0.727
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.699
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.699
GRMZM2G095239 Zea mays GRMZM2G095239 N 0.909
GRMZM2G163291 Zea mays GRMZM2G163291 N 0.783
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.769
LPERR03G22590 Leersia perrieri LPERR03G22590 N 0.716
mg015409m Mimulus guttatus mg015409m N 0.671
mgf000125m Mimulus guttatus mgf000125m I 0.691
mgf004823m Mimulus guttatus mgf004823m I 0.771
mgf010975m Mimulus guttatus mgf010975m I 0.691
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.688
MLOC_34636 Hordeum vulgare MLOC_34636 N 0.693
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.741
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.699
MTR_8g092810 Medicago truncatula MTR_8g092810 I 0.665
MTR_8g494240 Medicago truncatula MTR_8g494240 I 0.741
Pavir.Eb00490 Panicum virgatum Pavir.Eb00490 N 0.723
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N 0.909
Pavir.J13527 Panicum virgatum Pavir.J13527 N 0.723
Pavir.J17249 Panicum virgatum Pavir.J17249 N 0.723
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.691
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.738
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.675
Sb01g013670 Sorghum bicolor Sb01g013670 N 0.909
Sb03g005080 Sorghum bicolor Sb03g005080 N 0.783
Si002375m.g Setaria italica Si002375m.g N 0.723
Si036471m.g Setaria italica Si036471m.g N 0.909
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.738
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.691
Traes_5AL_1FB74A6E1 Triticum aestivum Traes_5AL_1FB74A6E1 N 0.694
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.688
Traes_5BL_692FEF87A Triticum aestivum Traes_5BL_692FEF87A N 0.715
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.688
Traes_5DL_1C6A8C773 Triticum aestivum Traes_5DL_1C6A8C773 N 0.694
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.677
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.688
TRIUR3_26840 Triticum urartu TRIUR3_26840 N 0.694
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.682
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.682