CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J05795
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.J05795
T289334_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J05795.1.p
Myb
115
161
KGSWTEEEDSILKAMVTQLGERKWSVIAQSLPGRIGKQCRERWINHL
Pavir.J05795.1.p
Myb
169
213
DIWTEEDDKLLIGAHKYFGNRWSSIARFLPGRSENAIKNHWNATK
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0001621101
Ascaris lumbricoides
ALUE_0001621101
N
0.000
ASU_01558
Ascaris suum
ASU_01558
N
0.000
CJA36291
Caenorhabditis japonica
CJA36291
N
0.000
L889_g3780
Steinernema feltiae
L889_g3780
N
0.000
TCNE_0001343401
Toxocara canis
TCNE_0001343401
N
0.000