Thhalv10001097m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10001097m.g T289924_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.883 0.978
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.883 0.978
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.788 0.848
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10001097m Myb 7 53
Thhalv10001097m Myb 59 103

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

558 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_04451 Colletotrichum fioriniae CFIO01_04451 N
CGGC5_14366 Colletotrichum gloeosporioides CGGC5_14366 N
gw1.13.131.1 Dictyostelium purpureum gw1.13.131.1 I