CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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3829_YDR026C
(
Saccharomyces paradoxus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
3829_YDR026C
T290618_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NSI1
M08594_2.00
Saccharomyces cerevisiae
ACCCGG
CCGGGT
Misc
DeBoer et al.(2011)
YDR026C_696
0.755
0.907
NSI1
M08460_2.00
Saccharomyces cerevisiae
TTTACCCGGM
KCCGGGTAAA
COMPILED
Mathelier et al.(2014)
MA0421.1
0.755
0.907
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
3829_YDR026C
Myb
18
50
TDGVIRDGFWANISKVLPYRTRSSIYKHIRRKY
3829_YDR026C
Myb
56
100
RGKWTPEEDQELARLCLEKEGHWTEVGKSLGRMPEDCRDRWRNYM
3829_YDR026C
Myb
108
127
SKRWSKEEEQLLTTVVNEMI
3829_YDR026C
Myb
152
197
YTRGPKGKRISDNPTFKDMINWTVVSERMSGTRSRIQCRYKWNKLV
3829_YDR026C
Myb
211
258
SERKWLLEKLSQLSKASYSNIDWNSIAASKPGSPRTGLELRLCYEQMR
Links
Other
Myb/SANT
family TFs
Other
Saccharomyces paradoxus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_11100
Cladophialophora psammophila
A1O5_11100
N
G647_03400
Cladophialophora carrionii
G647_03400
N
HMPREF1120_09202
Exophiala dermatitidis
HMPREF1120_09202
N
PV04_03925
Capronia semiimmersa
PV04_03925
N
PV05_06508
Exophiala xenobiotica
PV05_06508
N
PV06_06380
Exophiala oligosperma
PV06_06380
N
PV07_04643
Cladophialophora immunda
PV07_04643
N
PV08_08620
Exophiala spinifera
PV08_08620
N
PV10_09196
Exophiala mesophila
PV10_09196
N
PV11_02025
Exophiala sideris
PV11_02025
N
Z518_11212
Rhinocladiella mackenziei
Z518_11212
N