Bo1g017410 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo1g017410 T292290_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.996 0.983
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.996 0.983
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.973 0.748
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.973 0.748
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.952 0.730
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.949 0.722
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.884 0.696
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g017410.1 NAC/NAM 60 200

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

314 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008139 Ailuropoda melanoleuca ENSAMEG00000008139 I 0.000
ENSCSAG00000006278 Chlorocebus sabaeus ENSCSAG00000006278 I 0.000
ENSMMUP00000019015 Macaca fascicularis ENSMMUP00000019015 I 0.000
ENSMPUG00000000169 Mustela putorius furo ENSMPUG00000000169 I 0.000
ENSNLEG00000017881 Nomascus leucogenys ENSNLEG00000017881 I 0.000
ENSOARG00000019279 Ovis aries ENSOARG00000019279 I 0.000
ENSP00000301042-D1 Bos grunniens ENSP00000301042-D1 I 0.000
ENSPANG00000014075 Papio anubis ENSPANG00000014075 I 0.000
ENSPPYG00000004457 Pongo abelii ENSPPYG00000004457 I 0.000
ENSSTOG00000001970 Ictidomys tridecemlineatus ENSSTOG00000001970 I 0.000
ENSTSYG00000001375 Tarsius syrichta ENSTSYG00000001375 I 0.000
Myotis_brandtii_ZNF641_10022121 Myotis brandtii Myotis_brandtii_ZNF641_10022121 I 0.000
Zfp641 Mus musculus ENSMUSG00000022987 I 0.000
Zfp641 Rattus norvegicus ENSRNOG00000032447 I 0.000
Zfp641 Dipodomys ordii ENSDORG00000011810 I 0.000
ZNF641 Erinaceus europaeus ENSEEUG00000002648 I 0.000
ZNF641 Bos taurus ENSBTAG00000016496 I 0.000
ZNF641 Canis familiaris ENSCAFG00000009010 I 0.000
ZNF641 Callithrix jacchus ENSCJAG00000020716 I 0.000
ZNF641 Tursiops truncatus ENSTTRG00000015952 I 0.000
ZNF641 Dasypus novemcinctus ENSDNOG00000014189 I 0.000
ZNF641 Tupaia belangeri ENSTBEG00000002375 I 0.000
ZNF641 Sus scrofa ENSSSCG00000021654 I 0.000
ZNF641 Sorex araneus ENSSARG00000009301 I 0.000
ZNF641 Equus caballus ENSECAG00000022720 I 0.000
ZNF641 Pan troglodytes ENSPTRG00000004878 I 0.000
ZNF641 Microcebus murinus ENSMICG00000007360 I 0.000
ZNF641 Procavia capensis ENSPCAG00000005206 I 0.000
ZNF641 Echinops telfairi ENSETEG00000017660 I 0.000
ZNF641 Otolemur garnettii ENSOGAG00000005519 I 0.000
ZNF641 Oryctolagus cuniculus ENSOCUG00000005451 I 0.000
ZNF641 Felis catus ENSFCAG00000001972 I 0.000
ZNF641 Homo sapiens ENSG00000167528 D 0.000
ZNF641 Gorilla gorilla ENSGGOG00000013643 I 0.000
ZNF641 Loxodonta africana ENSLAFG00000029324 I 0.000
ZNF641 Macaca mulatta ENSMMUG00000014484 I 0.000
ZNF641 Myotis lucifugus ENSMLUG00000003695 I 0.000