CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g105630
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo7g105630
T292452_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac071
M07219_2.00
Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_col_a
0.941
0.917
anac071
M07220_2.00
Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a
0.941
0.917
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.923
0.835
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.923
0.835
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g105630.1
NAC/NAM
9
137
PPGFRFHPTDEELIGYYLSRKVEGLEIELEVIPVIDLYKFDPWELPDKSFLPNRDMEWFFFCPRDKKYPNGSRTNRATKAGYWKATGKDRQISCKSSGATIGYRKTLVFYEGRAPLGDRTIWFMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000009025
Ailuropoda melanoleuca
ENSAMEG00000009025
I
0.000
ENSCSAG00000008491
Chlorocebus sabaeus
ENSCSAG00000008491
I
0.000
ENSMPUG00000000701
Mustela putorius furo
ENSMPUG00000000701
I
0.000
ENSNLEG00000001439
Nomascus leucogenys
ENSNLEG00000001439
I
0.000
ENSP00000341151-D16
Bos grunniens
ENSP00000341151-D16
I
0.000
ENSP00000414887
Macaca fascicularis
ENSP00000414887
I
0.000
ENSPANG00000014426
Papio anubis
ENSPANG00000014426
I
0.000
ENSPPYG00000029650
Pongo abelii
ENSPPYG00000029650
I
0.000
Zfp879
Rattus norvegicus
ENSRNOG00000030517
I
0.000
Zfp879
Mus musculus
ENSMUSG00000044296
I
0.000
ZNF354C
Dasypus novemcinctus
ENSDNOG00000011675
I
0.000
ZNF879
Macaca mulatta
ENSMMUG00000002484
I
0.000
ZNF879
Pan troglodytes
ENSPTRG00000041282
I
0.000
ZNF879
Otolemur garnettii
ENSOGAG00000032797
I
0.000
ZNF879
Oryctolagus cuniculus
ENSOCUG00000016395
I
0.000
ZNF879
Loxodonta africana
ENSLAFG00000018662
I
0.000
ZNF879
Gorilla gorilla
ENSGGOG00000023048
I
0.000
ZNF879
Homo sapiens
ENSG00000234284
D
0.000
ZNF879
Felis catus
ENSFCAG00000025356
I
0.000
ZNF879
Echinops telfairi
ENSETEG00000004774
I
0.000
ZNF879
Erinaceus europaeus
ENSEEUG00000011407
I
0.000
ZNF879
Equus caballus
ENSECAG00000023471
I
0.000
ZNF879
Callithrix jacchus
ENSCJAG00000018904
I
0.000
ZNF879
Canis familiaris
ENSCAFG00000030461
I
0.000