Bra008849 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra008849 T292559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.943 0.981
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.943 0.981
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.943 0.981
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008849.1-P NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m009035 Ricinus communis 30128.m009035 I 0.905
30147.m014441 Ricinus communis 30147.m014441 N 0.882
ANAC083 Vitis vinifera VIT_01s0146g00280 I 0.896
ANAC083 Arabidopsis lyrata scaffold_601328.1 I 0.943
Aquca_011_00050 Aquilegia coerulea Aquca_011_00050 I 0.871
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I 0.888
Bo2g011120 Brassica oleracea Bo2g011120 I 0.962
Bo3g009040 Brassica oleracea Bo3g009040 I 0.959
Bo4g181990 Brassica oleracea Bo4g181990 I 0.917
Bo9g168950 Brassica oleracea Bo9g168950 I 0.958
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I 0.939
Bra006186 Brassica rapa Bra006186 I 0.957
Bra021856 Brassica rapa Bra021856 I 0.917
Bra023395 Brassica rapa Bra023395 I 0.958
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I 0.939
Carubv10002548m.g Capsella rubella Carubv10002548m.g I 0.936
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I 0.903
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I 0.900
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I 0.879
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I 0.895
Cla001517 Citrullus lanatus Cla001517 I 0.914
Cla011059 Citrullus lanatus Cla011059 I 0.927
Cucsa.095210 Cucumis sativus Cucsa.095210 N 0.889
Cucsa.349370 Cucumis sativus Cucsa.349370 I 0.913
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I 0.899
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I 0.911
evm.TU.supercontig_4.138 Carica papaya evm.TU.supercontig_4.138 N 0.885
GLYMA08G47520 Glycine max GLYMA08G47520 I 0.892
GLYMA18G53954 Glycine max GLYMA18G53954 I 0.893
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I 0.904
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I 0.896
GSMUA_Achr10G11910_001 Musa acuminata GSMUA_Achr10G11910_001 N 0.897
MDP0000126517 Malus domestica MDP0000126517 I 0.896
MDP0000130123 Malus domestica MDP0000130123 I 0.897
NAC083 Arabidopsis thaliana AT5G13180 D 0.943
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I 0.895
PK12461.1 Cannabis sativa PK12461.1 I 0.893
Pm007070 Prunus mume Pm007070 I 0.917
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I 0.912
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I 0.908
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I 0.917
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I 0.909
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I 0.892
TCM_008477 Theobroma cacao TCM_008477 I 0.904
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I 0.959