CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra020182
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra020182
T292598_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020182.1-P
NAC/NAM
22
147
FPGFKFSPTDVELISYYLKRKMDGLERSVEVIPETDIYNFEPWDLPDKSIVKSDTEWFFFCARGKKYPHGSQNRRATKMGYWKATGKERDVKSSSQVIGTKRTLVFHIGRAPKGERTEWLMHEYCM
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH48
Arabidopsis thaliana
AT2G42300
I
Eucgr.H02392
Eucalyptus grandis
Eucgr.H02392
N
MLOC_64018
Hordeum vulgare
MLOC_64018
I
OMERI01G06290
Oryza meridionalis
OMERI01G06290
N
OMERI12G12420
Oryza meridionalis
OMERI12G12420
N
ONIVA03G30270
Oryza nivara
ONIVA03G30270
N
orange1.1g014374m.g
Citrus sinensis
orange1.1g014374m.g
I
ORGLA04G0184100
Oryza glaberrima
ORGLA04G0184100
N
ORUFI03G30210
Oryza rufipogon
ORUFI03G30210
N
Pavir.Ba03259
Panicum virgatum
Pavir.Ba03259
N
Pavir.Ca02967
Panicum virgatum
Pavir.Ca02967
N
PGSC0003DMG400008805
Solanum tuberosum
PGSC0003DMG400008805
I
SapurV1A.0018s0230
Salix purpurea
SapurV1A.0018s0230
I
Traes_4DS_069F2900B
Triticum aestivum
Traes_4DS_069F2900B
N
Traes_4DS_ECE3F21FA
Triticum aestivum
Traes_4DS_ECE3F21FA
N
VIT_00s0384g00020
Vitis vinifera
VIT_00s0384g00020
N