Bra034119 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra034119 T292675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.959 0.956
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.959 0.956
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034119.1-P NAC/NAM 29 155

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR02G10380 Leersia perrieri LPERR02G10380 N 0.000
LPERR02G10620 Leersia perrieri LPERR02G10620 N 0.000
LPERR02G10770 Leersia perrieri LPERR02G10770 N 0.000
OB01G21750 Oryza brachyantha OB01G21750 N 0.000
OB03G33030 Oryza brachyantha OB03G33030 N 0.000
OBART03G24330 Oryza barthii OBART03G24330 N 0.000
OBART08G15340 Oryza barthii OBART08G15340 N 0.000
OGLUM03G25150 Oryza glumaepatula OGLUM03G25150 N 0.000
OGLUM08G16100 Oryza glumaepatula OGLUM08G16100 N 0.000
OMERI03G22160 Oryza meridionalis OMERI03G22160 N 0.000
ONIVA03G25700 Oryza nivara ONIVA03G25700 N 0.000
ONIVA08G16460 Oryza nivara ONIVA08G16460 N 0.000
OPUNC03G22520 Oryza punctata OPUNC03G22520 N 0.000
OPUNC08G12800 Oryza punctata OPUNC08G12800 N 0.000
ORGLA03G0226500 Oryza glaberrima ORGLA03G0226500 N 0.000
ORUFI03G24940 Oryza rufipogon ORUFI03G24940 N 0.000