CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G018553
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G018553
T293187_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.879
0.684
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G018553_P01
NAC/NAM
20
149
PPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYRFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGDGYWKATGADKPVAPRAAAADARTLGIKKALVFYAGKAPRGVKTDWIMHEYRL
GRMZM2G018553_P02
NAC/NAM
20
149
PPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYRFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGDGYWKATGADKPVAPRAAAADARTLGIKKALVFYAGKAPRGVKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
328 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006963
Oryza indica
BGIOSGA006963
N
OGLUM02G07080
Oryza glumaepatula
OGLUM02G07080
N
ONIVA02G08710
Oryza nivara
ONIVA02G08710
N
OPUNC02G06220
Oryza punctata
OPUNC02G06220
N
ORUFI02G07160
Oryza rufipogon
ORUFI02G07160
N