CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g036030
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_4g036030
T293770_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.927
0.877
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.917
0.860
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.917
0.860
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.917
0.860
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.917
0.860
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.879
0.825
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.876
0.772
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH29378
NAC/NAM
8
135
PPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLEEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIYSKHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
308 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000009609
Ailuropoda melanoleuca
ENSAMEG00000009609
N
0.000
ENSBTAP00000014893-D1
Bos grunniens
ENSBTAP00000014893-D1
N
0.000
ENSCSAG00000000749
Chlorocebus sabaeus
ENSCSAG00000000749
N
0.000
ENSGGOG00000006842
Gorilla gorilla
ENSGGOG00000006842
N
0.000
ENSLACG00000015746
Latimeria chalumnae
ENSLACG00000015746
N
0.000
ENSNLEG00000008620
Nomascus leucogenys
ENSNLEG00000008620
N
0.000
ENSOANG00000029971
Ornithorhynchus anatinus
ENSOANG00000029971
N
0.000
ENSOARG00000011230
Ovis aries
ENSOARG00000011230
N
0.000
ENSP00000383703
Macaca fascicularis
ENSP00000383703
N
0.000
ENSPANG00000000281
Papio anubis
ENSPANG00000000281
N
0.000
ENSPPYG00000001935
Pongo abelii
ENSPPYG00000001935
N
0.000
ENSPSIG00000004751
Pelodiscus sinensis
ENSPSIG00000004751
N
0.000
ENSSHAG00000008023
Sarcophilus harrisii
ENSSHAG00000008023
N
0.000
ENSSSCG00000003378
Sus scrofa
ENSSSCG00000003378
N
0.000
ENSSTOG00000003655
Ictidomys tridecemlineatus
ENSSTOG00000003655
N
0.000
Myotis_brandtii_THAP3_10024041
Myotis brandtii
Myotis_brandtii_THAP3_10024041
N
0.000
THAP3
Erinaceus europaeus
ENSEEUG00000003448
N
0.000
THAP3
Bos taurus
ENSBTAG00000011214
N
0.000
THAP3
Canis familiaris
ENSCAFG00000019625
N
0.000
THAP3
Callithrix jacchus
ENSCJAG00000000237
N
0.000
THAP3
Tursiops truncatus
ENSTTRG00000006348
N
0.000
THAP3
Cavia porcellus
ENSCPOG00000021946
N
0.000
THAP3
Dasypus novemcinctus
ENSDNOG00000013851
N
0.000
THAP3
Equus caballus
ENSECAG00000009778
N
0.000
Thap3
Rattus norvegicus
ENSRNOG00000026840
N
0.000
THAP3
Pteropus vampyrus
ENSPVAG00000013024
N
0.000
THAP3
Pan troglodytes
ENSPTRG00000000093
N
0.000
THAP3
Monodelphis domestica
ENSMODG00000005922
N
0.000
THAP3
Felis catus
ENSFCAG00000000662
N
0.000
THAP3
Homo sapiens
ENSG00000041988
N
0.000
THAP3
Ochotona princeps
ENSOPRG00000001961
N
0.000
THAP3
Otolemur garnettii
ENSOGAG00000029491
N
0.000
THAP3
Oryctolagus cuniculus
ENSOCUG00000008846
N
0.000
THAP3
Loxodonta africana
ENSLAFG00000015981
N
0.000
THAP3
Myotis lucifugus
ENSMLUG00000029196
N
0.000
THAP3
Macaca mulatta
ENSMMUG00000002047
N
0.000
Thap3
Mus musculus
ENSMUSG00000039759
N
0.000