CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM08G03540
(
Oryza glumaepatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OGLUM08G03540
T294176_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.921
0.539
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM08G03540.1
NAC/NAM
10
142
PLGFRFHPTDEELVRHYLKGKITGQIRSEAEVIPEIDVCKCEPWDLPDKSLIRSDDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVIRSKGDKKKQQVIGMKKTLVFHRGRAPKGERTGWIMHEYRT
OGLUM08G03540.2
NAC/NAM
10
142
PLGFRFHPTDEELVRHYLKGKITGQIRSEAEVIPEIDVCKCEPWDLPDKSLIRSDDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVIRSKGDKKKQQVIGMKKTLVFHRGRAPKGERTGWIMHEYRT
Links
Other
NAC/NAM
family TFs
Other
Oryza glumaepatula
TFs
234 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP11313
Atta cephalotes
ACEP11313
N
ACYPI061276
Acyrthosiphon pisum
ACYPI061276
N
ALUE_0001309901
Ascaris lumbricoides
ALUE_0001309901
N
ANCCEY_10235
Ancylostoma ceylanicum
ANCCEY_10235
N
ASIM_0001464801
Anisakis simplex
ASIM_0001464801
N
Cflo_14905--NA
Camponotus floridanus
Cflo_14905--NA
N
CGI_10026391
Crassostrea gigas
CGI_10026391
N
ENSTNIG00000002824
Tetraodon nigroviridis
ENSTNIG00000002824
N
GK24763
Drosophila willistoni
FBgn0226723
N
HCOI01666100
Haemonchus contortus
HCOI01666100
N
Hsal_04211--NA
Harpegnathos saltator
Hsal_04211--NA
N
Hsal_09927--NA
Harpegnathos saltator
Hsal_09927--NA
N
L596_g2494
Steinernema carpocapsae
L596_g2494
N
L892_g10863
Steinernema scapterisci
L892_g10863
N
MCINX013767
Melitaea cinxia
MCINX013767
N
nRc.2.0.1.g02816
Romanomermis culicivorax
nRc.2.0.1.g02816
N
SINV24002
Solenopsis invicta
SINV24002
N
WUBG_07365
Wuchereria bancrofti
WUBG_07365
N
WUBG_15783
Wuchereria bancrofti
WUBG_15783
N
XP_002157431.1
Hydra magnipapillata
XP_002157431.1
N
XP_002944476
Xenopus tropicalis
XP_002944476
N