POPTR_0003s16490 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0003s16490 T295235_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.931 0.868
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.931 0.868
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.931 0.868
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s16490.1 NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSDORG00000005188 Dipodomys ordii ENSDORG00000005188 N
ENSPANG00000020174 Papio anubis ENSPANG00000020174 N
ENSSTOG00000010776 Ictidomys tridecemlineatus ENSSTOG00000010776 N
HES3 Canis familiaris ENSCAFG00000019571 N
HES3 Callithrix jacchus ENSCJAG00000000154 N
HES3 Cavia porcellus ENSCPOG00000026623 N
HES3 Erinaceus europaeus ENSEEUG00000005956 N
HES3 Felis catus ENSFCAG00000028408 N
HES3 Homo sapiens ENSG00000173673 N
Hes3 Mus musculus ENSMUSG00000028946 N
HES3 Otolemur garnettii ENSOGAG00000024336 N
HES3 Ochotona princeps ENSOPRG00000011063 N
HES3 Pteropus vampyrus ENSPVAG00000009777 N
Hes3 Rattus norvegicus ENSRNOG00000010893 N