CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0005s06510
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0005s06510
T295247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s06510.1
NAC/NAM
11
127
PPGFIFSPSDEELILHFLDRKASLLPCHPDIIPDLGLYPQDPWQLEGRALWSENQWYYFSRVMENQATGNGFWKPLDIEEPIFSSSAGKKVGLKKYLVYCIGPEGVETNWMMQEYHL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29683.m000467
Ricinus communis
29683.m000467
N
0.889
ANAC104
Vitis vinifera
VIT_12s0055g00510
N
0.908
Aquca_022_00269
Aquilegia coerulea
Aquca_022_00269
N
0.908
chr4.CM0337.760.nc
Lotus japonicus
chr4.CM0337.760.nc
N
0.909
chr6.CM0314.510.nd
Lotus japonicus
chr6.CM0314.510.nd
N
0.918
GLYMA05G24910
Glycine max
GLYMA05G24910
N
0.920
GLYMA08G08010
Glycine max
GLYMA08G08010
N
0.917
GLYMA08G19300
Glycine max
GLYMA08G19300
N
0.914
GLYMA15G05690
Glycine max
GLYMA15G05690
N
0.925
Gorai.005G217400
Gossypium raimondii
Gorai.005G217400
N
0.919
MTR_4g094302
Medicago truncatula
MTR_4g094302
N
0.879
POPTR_0007s04250
Populus trichocarpa
POPTR_0007s04250
N
0.959
SapurV1A.0171s0340
Salix purpurea
SapurV1A.0171s0340
I
0.902
SapurV1A.1092s0100
Salix purpurea
SapurV1A.1092s0100
N
0.970
TCM_007543
Theobroma cacao
TCM_007543
I
0.879