CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s13140
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0006s13140
T295263_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s13140.1
NAC/NAM
30
156
PPGFRFHPSDEELIVHYLKNRVSSSPLPASIIAEIDLYKYNPWELPKKALFGVDEWYFFTPRDRKYPNGARPNRAAASGYWKATGTDKSIFNSFGTAKIGVKKTLVFYEGRPPKGLKTDWNMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava3577.m1
Manihot esculenta
cassava3577.m1
I
0.873
chr1.CM0104.240.nc
Lotus japonicus
chr1.CM0104.240.nc
I
0.872
chr3.CM0111.130.nd
Lotus japonicus
chr3.CM0111.130.nd
I
0.877
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.872
Lus10007410.g
Linum usitatissimum
Lus10007410.g
I
0.871
Lus10015076.g
Linum usitatissimum
Lus10015076.g
N
0.897
Lus10023179.g
Linum usitatissimum
Lus10023179.g
N
0.891
TCM_041055
Theobroma cacao
TCM_041055
I
0.882