CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s03840
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0007s03840
T295271_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s03840.1
NAC/NAM
8
134
PPGFRFHPTDVELVKYYLKRKVLGKKFHFQAIAEIEINKYAPWDLPNKSCLRTRDLKWYFFCPTEKKYASGVRKKRATDIGYWKTTGKDRSVQYKNEVVGMIKTLVFHIGKPPRGERTDWVMYEYRL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.897
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.897
Ca_04187
Cicer arietinum
Ca_04187
N
0.898
POPTR_0005s06040
Populus trichocarpa
POPTR_0005s06040
N
0.948
SapurV1A.0550s0150
Salix purpurea
SapurV1A.0550s0150
N
0.942