POPTR_0010s23630 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0010s23630 T295293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.940 0.868
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.940 0.868
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.874 0.789
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.874 0.789
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.874 0.789
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.874 0.789
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s23630.1 NAC/NAM 40 166

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AHRR Meleagris gallopavo ENSMGAG00000007591 N 0.000
AHRR Pteropus vampyrus ENSPVAG00000007881 N 0.000
Ahrr Rattus norvegicus ENSRNOG00000014721 N 0.000
AHRR Ochotona princeps ENSOPRG00000013408 N 0.000
AHRR Otolemur garnettii ENSOGAG00000010416 N 0.000
ahrr Takifugu rubripes ENSTRUG00000003745 N 0.000
Ahrr Mus musculus ENSMUSG00000021575 N 0.000
AHRR Myotis lucifugus ENSMLUG00000012589 N 0.000
AHRR Gorilla gorilla ENSGGOG00000013694 N 0.000
AHRR Felis catus ENSFCAG00000015430 N 0.000
AHRR Bos taurus ENSBTAG00000026527 N 0.000
AHRR Equus caballus ENSECAG00000017812 N 0.000
AHRR Homo sapiens ENSG00000063438 N 0.000
ahrrb Gasterosteus aculeatus ENSGACG00000001925 N 0.000
ahrrb Oryzias latipes ENSORLG00000005309 N 0.000
ahrrb Tetraodon nigroviridis ENSTNIG00000008751 N 0.000
ahrrb Danio rerio ENSDARG00000052618 N 0.000
ENSAMEG00000008443 Ailuropoda melanoleuca ENSAMEG00000008443 N 0.000
ENSAMXG00000015160 Astyanax mexicanus ENSAMXG00000015160 N 0.000
ENSAPLG00000013653 Anas platyrhynchos ENSAPLG00000013653 N 0.000
ENSBTAP00000011351-D1 Bos grunniens ENSBTAP00000011351-D1 N 0.000
ENSCSAG00000017432 Chlorocebus sabaeus ENSCSAG00000017432 N 0.000
ENSDORG00000008881 Dipodomys ordii ENSDORG00000008881 N 0.000
ENSGMOG00000009114 Gadus morhua ENSGMOG00000009114 N 0.000
ENSMMUP00000001012 Macaca fascicularis ENSMMUP00000001012 N 0.000
ENSMPUG00000010246 Mustela putorius furo ENSMPUG00000010246 N 0.000
ENSNLEG00000010815 Nomascus leucogenys ENSNLEG00000010815 N 0.000
ENSOARG00000015756 Ovis aries ENSOARG00000015756 N 0.000
ENSOCUG00000021638 Oryctolagus cuniculus ENSOCUG00000021638 N 0.000
ENSONIG00000017966 Oreochromis niloticus ENSONIG00000017966 N 0.000
ENSPANG00000023865 Papio anubis ENSPANG00000023865 N 0.000
ENSPFOG00000012230 Poecilia formosa ENSPFOG00000012230 N 0.000
ENSPSIG00000007107 Pelodiscus sinensis ENSPSIG00000007107 N 0.000
ENSTGUG00000008731 Taeniopygia guttata ENSTGUG00000008731 N 0.000
fgenesh2_pg.scaffold_330000001 Branchiostoma floridae fgenesh2_pg.scaffold_330000001 N 0.000
PDCD6 Macaca mulatta ENSMMUG00000000752 N 0.000