CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si001354m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si001354m.g
T295674_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si001352m
NAC/NAM
7
133
PPGFRFHPTDVELCSYYLKRKITGKKLLVEAIAEVELYKYSPWDLPDKSCVKSRDMEWYFFCPRDKKYATGSRANRLTPNGFWKSTGNDRTIVLNTRIVGMKKTLVFHEGKAPRGDRTDWVMYEYRM
Si001354m
NAC/NAM
7
133
PPGFRFHPTDVELCSYYLKRKITGKKLLVEAIAEVELYKYSPWDLPDKSCVKSRDMEWYFFCPRDKKYATGSRANRLTPNGFWKSTGNDRTIVLNTRIVGMKKTLVFHEGKAPRGDRTDWVMYEYRM
Si001359m
NAC/NAM
7
133
PPGFRFHPTDVELCSYYLKRKITGKKLLVEAIAEVELYKYSPWDLPDKSCVKSRDMEWYFFCPRDKKYATGSRANRLTPNGFWKSTGNDRTIVLNTRIVGMKKTLVFHEGKAPRGDRTDWVMYEYRM
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava20837.m1
Manihot esculenta
cassava20837.m1
N
0.000
cassava41267.m1
Manihot esculenta
cassava41267.m1
N
0.000
Eucgr.G03078
Eucalyptus grandis
Eucgr.G03078
N
0.000
evm.TU.supercontig_19.151
Carica papaya
evm.TU.supercontig_19.151
N
0.000
GLYMA18G02910
Glycine max
GLYMA18G02910
N
0.000
Gorai.011G291500
Gossypium raimondii
Gorai.011G291500
N
0.000
Gorai.013G016900
Gossypium raimondii
Gorai.013G016900
N
0.000
LBD21
Vitis vinifera
VIT_13s0067g01450
N
0.000
MDP0000220708
Malus domestica
MDP0000220708
N
0.000
Pm018957
Prunus mume
Pm018957
N
0.000
POPTR_0008s07150
Populus trichocarpa
POPTR_0008s07150
N
0.000
POPTR_0010s19340
Populus trichocarpa
POPTR_0010s19340
N
0.000
PRUPE_ppa012284mg
Prunus persica
PRUPE_ppa012284mg
N
0.000
SapurV1A.0061s0510
Salix purpurea
SapurV1A.0061s0510
N
0.000
SapurV1A.0650s0120
Salix purpurea
SapurV1A.0650s0120
N
0.000
TCM_042466
Theobroma cacao
TCM_042466
N
0.000