CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Si017393m.g *(Setaria italica)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	Si017393m.g	T295726_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
anac075 M07223_2.00	Arabidopsis thaliana	CTTSWNNNWYAMGYT	ARCKTRWNNNWSAAG	Dap-seq OMalley et al.(2016) ANAC075_col_a	0.899	0.553
PK27085.1 M01293_2.00	Cannabis sativa	AATTTATT	AATAAATT	PBM Lambert et al.(2019) pTH11262	0.897	0.553
NAC073 M07221_2.00	Arabidopsis thaliana	CTTSWNNNWYAMGYH	DRCKTRWNNNWSAAG	Dap-seq OMalley et al.(2016) SND2_col_a	0.885	0.588
NAC073 M07222_2.00	Arabidopsis thaliana	CKTSWNNNWYACGYW	WRCGTRWNNNWSAMG	Dap-seq OMalley et al.(2016) SND2_colamp_a	0.885	0.588
NAC010 M07167_2.00	Arabidopsis thaliana	NWWNCTTSWNNNWYAMGHHWYH	DRWDDCKTRWNNNWSAAGNWWN	Dap-seq OMalley et al.(2016) SND3_colamp_a	0.878	0.526
NAC010 M07168_2.00	Arabidopsis thaliana	CKTSWNNNWYAMGYW	WRCKTRWNNNWSAMG	Dap-seq OMalley et al.(2016) SND3_col_b	0.878	0.526
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Si017393m	NAC/NAM	58	202	PAGVKFDPSDLELLEHLEEKIGLGGSRPHVLIDEFIPIIDNDEGICYSHPENLPGMKTDGSNAHFFHRVSKAYGRGQRKRRRVISCSSDHTVTDEHVRWHKTGRSKPIYDNGVKKGWKKIMVLYKTSHRGEKPDRAHWVMHQYHL

Links
Other NAC/NAM family TFs
Other *Setaria italica* TFs