Solyc11g008000.1 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc11g008000.1 T295897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.874 0.754
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.874 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g008000.1.1 NAC/NAM 11 138

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.874
ANAC050 Arabidopsis thaliana AT3G10480 D 0.874
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.873
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.874
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.874
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.874
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.874
Cla020838 Citrullus lanatus Cla020838 I 0.876
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.872
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.901
MDP0000437676 Malus domestica MDP0000437676 I 0.879
mgf000623m Mimulus guttatus mgf000623m I 0.926
mgf004743m Mimulus guttatus mgf004743m I 0.912
PGSC0003DMG400031071 Solanum tuberosum PGSC0003DMG400031071 N 0.964
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.937
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.872
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.934
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.880
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.896