CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_026030
(
Theobroma cacao
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
TCM_026030
T295968_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB
VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.905
0.830
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.905
0.830
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.872
0.768
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.872
0.768
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY10731
NAC/NAM
75
208
PPGFRFHPTDEELILHYLKKKLSSSPFPVSIIADVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIFTSSMVAGGGGVQENIGVKKALVFYKGRPPKGIKTNWIMHEYRL
EOY10732
NAC/NAM
9
142
PPGFRFHPTDEELILHYLKKKLSSSPFPVSIIADVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIFTSSMVAGGGGVQENIGVKKALVFYKGRPPKGIKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Theobroma cacao
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_021050
Aspergillus clavatus
CADACLAG00002292
I
AFUA_1G14360
Aspergillus fumigatus
CADAFUAG00007111
I
ATEG_00638
Aspergillus terreus
CADATEAG00009286
I
AUEXF2481DRAFT_183957
Aureobasidium subglaciale
AUEXF2481DRAFT_183957
I
BDDG_03741
Blastomyces dermatitidis
BDDG_03741
I
CADAFLAG00005530
Aspergillus flavus
CADAFLAG00005530
I
CADANGAG00001240
Aspergillus niger
CADANGAG00001240
I
CADAORAG00005134
Aspergillus oryzae
CADAORAG00005134
I
CIMG_03190
Coccidioides immitis
CIMG_03190
I
EPUS_07650
Endocarpon pusillum
EPUS_07650
I
EURHEDRAFT_447655
Aspergillus ruber
EURHEDRAFT_447655
I
fgenesh1_pm.00042_#_235
Aspergillus carbonarius
fgenesh1_pm.00042_#_235
I
gw1.6.805.1
Mycosphaerella graminicola
gw1.6.805.1
I
HCBG_01404
Histoplasma capsulatum
HCBG_01404
I
M437DRAFT_18298
Aureobasidium melanogenum
M437DRAFT_18298
I
M438DRAFT_276450
Aureobasidium pullulans
M438DRAFT_276450
I
MBM_04933
Marssonina brunnea
MBM_04933
I
MYCFIDRAFT_140661
Pseudocercospora fijiensis
MYCFIDRAFT_140661
I
Mycgr3G21205
Zymoseptoria tritici
Mycgr3G21205
I
PAAG_12029
Paracoccidioides sp lutzii
PAAG_12029
I
PABG_06000
Paracoccidioides brasiliensis
PABG_06000
I
Pc16g12950
Penicillium chrysogenum
Pc16g12950
I
PCH_Pc16g12950
Penicillium rubens
PCH_Pc16g12950
I
PDE_00300
Penicillium oxalicum
PDE_00300
I
PDIP_66730
Penicillium digitatum
PDIP_66730
I
PEX1_010850
Penicillium expansum
PEX1_010850
I
PITC_091680
Penicillium italicum
PITC_091680
I
PMAA_065570
Talaromyces marneffei
PMAA_065570
I
PMAA_065570
Penicillium marneffei
PMAA_065570
I
PVAR5_4079
Byssochlamys spectabilis
PVAR5_4079
I
TSTA_085600
Talaromyces stipitatus
TSTA_085600
I
U727_00432720241
Penicillium solitum
U727_00432720241
I