Cla004701 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla004701 T296539_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.912 0.561
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.912 0.561
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.889 0.596
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.889 0.596
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla004701 NAC/NAM 37 178

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000004005-D1 Bos grunniens ENSBTAP00000004005-D1 N 0.000
ENSCSAG00000019171 Chlorocebus sabaeus ENSCSAG00000019171 N 0.000
ENSLACG00000012827 Latimeria chalumnae ENSLACG00000012827 N 0.000
ENSMPUG00000019988 Mustela putorius furo ENSMPUG00000019988 N 0.000
ENSP00000377805 Macaca fascicularis ENSP00000377805 N 0.000
ENSPANG00000006957 Papio anubis ENSPANG00000006957 N 0.000
ENSPPYG00000003068 Pongo abelii ENSPPYG00000003068 N 0.000
ENSPSIG00000001900 Pelodiscus sinensis ENSPSIG00000001900 N 0.000
ENSSTOG00000024637 Ictidomys tridecemlineatus ENSSTOG00000024637 N 0.000
ENSVPAG00000009110 Vicugna pacos ENSVPAG00000009110 N 0.000
TIGD3 Otolemur garnettii ENSOGAG00000027212 N 0.000
Tigd3 Mus musculus ENSMUSG00000044390 N 0.000
TIGD3 Pan troglodytes ENSPTRG00000003873 N 0.000
Tigd3 Rattus norvegicus ENSRNOG00000023318 N 0.000
TIGD3 Sorex araneus ENSSARG00000009391 N 0.000
TIGD3 Sus scrofa ENSSSCG00000012994 N 0.000
TIGD3 Tupaia belangeri ENSTBEG00000008871 N 0.000
TIGD3 Oryctolagus cuniculus ENSOCUG00000026984 N 0.000
TIGD3 Bos taurus ENSBTAG00000003079 N 0.000
TIGD3 Macaca mulatta ENSMMUG00000019165 N 0.000
TIGD3 Myotis lucifugus ENSMLUG00000003893 N 0.000
TIGD3 Loxodonta africana ENSLAFG00000032647 N 0.000
TIGD3 Gorilla gorilla ENSGGOG00000014762 N 0.000
TIGD3 Homo sapiens ENSG00000173825 N 0.000
TIGD3 Felis catus ENSFCAG00000025695 N 0.000
TIGD3 Equus caballus ENSECAG00000006896 N 0.000
TIGD3 Dasypus novemcinctus ENSDNOG00000004634 N 0.000
TIGD3 Cavia porcellus ENSCPOG00000009317 N 0.000
TIGD3 Callithrix jacchus ENSCJAG00000022193 N 0.000
TIGD3 Canis familiaris ENSCAFG00000013628 N 0.000