CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
29917.m002016
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
29917.m002016
T296770_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.907
0.632
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.906
0.632
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29917.m002016
NAC/NAM
76
217
PAGVKFDPSDAELLEHLAAKCGIGNSKSHAFIDEFIPTLLEDKGICYTHPENLPGAKIDGSSVHFFHRTINAYATGQRKRRKVHNEHGSNEEHVRWHKTGKTKPVMENGIQKGCKKIMVLYKSSKKGTKPDKSNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
249 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005677
Calypte anna
Aan_R005677
I
0.000
Afo_R004508
Aptenodytes forsteri
Afo_R004508
I
0.000
ENSAMEG00000018337
Ailuropoda melanoleuca
ENSAMEG00000018337
I
0.000
ENSAMXG00000014502
Astyanax mexicanus
ENSAMXG00000014502
I
0.000
ENSAPLG00000011380
Anas platyrhynchos
ENSAPLG00000011380
I
0.000
ENSCPOG00000006636
Cavia porcellus
ENSCPOG00000006636
I
0.000
ENSCSAG00000012122
Chlorocebus sabaeus
ENSCSAG00000012122
I
0.000
ENSDORG00000012888
Dipodomys ordii
ENSDORG00000012888
I
0.000
ENSFALG00000006358
Ficedula albicollis
ENSFALG00000006358
I
0.000
ENSGMOG00000011063
Gadus morhua
ENSGMOG00000011063
I
0.000
ENSMEUG00000011212
Macropus eugenii
ENSMEUG00000011212
I
0.000
ENSMLUG00000002256
Myotis lucifugus
ENSMLUG00000002256
I
0.000
ENSMMUP00000003747
Macaca fascicularis
ENSMMUP00000003747
I
0.000
ENSMPUG00000009147
Mustela putorius furo
ENSMPUG00000009147
I
0.000
ENSNLEG00000016475
Nomascus leucogenys
ENSNLEG00000016475
I
0.000
ENSOARG00000001796
Ovis aries
ENSOARG00000001796
I
0.000
ENSONIG00000015268
Oreochromis niloticus
ENSONIG00000015268
I
0.000
ENSP00000267569-D1
Bos grunniens
ENSP00000267569-D1
I
0.000
ENSPANG00000019986
Papio anubis
ENSPANG00000019986
I
0.000
ENSPFOG00000007886
Poecilia formosa
ENSPFOG00000007886
I
0.000
ENSPFOG00000007903
Poecilia formosa
ENSPFOG00000007903
I
0.000
ENSPPYG00000006004
Pongo abelii
ENSPPYG00000006004
I
0.000
ENSSHAG00000017391
Sarcophilus harrisii
ENSSHAG00000017391
I
0.000
ENSSTOG00000026831
Ictidomys tridecemlineatus
ENSSTOG00000026831
I
0.000
ENSTBEG00000014483
Tupaia belangeri
ENSTBEG00000014483
I
0.000
ENSTNIG00000016355
Tetraodon nigroviridis
ENSTNIG00000016355
I
0.000
ENSXMAG00000004013
Xiphophorus maculatus
ENSXMAG00000004013
I
0.000
Gfo_R012906
Geospiza fortis
Gfo_R012906
I
0.000
ISCW023105
Ixodes scapularis
ISCW023105
I
0.000
JDP2
Pteropus vampyrus
ENSPVAG00000000672
I
0.000
JDP2
Taeniopygia guttata
ENSTGUG00000012219
I
0.000
JDP2
Pan troglodytes
ENSPTRG00000006555
I
0.000
JDP2
Otolemur garnettii
ENSOGAG00000024796
I
0.000
JDP2
Dasypus novemcinctus
ENSDNOG00000033141
I
0.000
JDP2
Ochotona princeps
ENSOPRG00000012032
I
0.000
JDP2
Anolis carolinensis
ENSACAG00000016944
I
0.000
JDP2
Oryctolagus cuniculus
ENSOCUG00000008466
I
0.000
JDP2
Monodelphis domestica
ENSMODG00000005909
I
0.000
JDP2
Meleagris gallopavo
ENSMGAG00000012755
I
0.000
JDP2
Loxodonta africana
ENSLAFG00000025757
I
0.000
JDP2
Gorilla gorilla
ENSGGOG00000010752
I
0.000
JDP2
Gallus gallus
ENSGALG00000010322
I
0.000
JDP2
Bos taurus
ENSBTAG00000009451
I
0.000
JDP2
Homo sapiens
ENSG00000140044
D
0.000
JDP2
Canis familiaris
ENSCAFG00000017042
I
0.000
JDP2
Callithrix jacchus
ENSCJAG00000020645
I
0.000
JDP2
Felis catus
ENSFCAG00000029464
I
0.000
JDP2
Equus caballus
ENSECAG00000014862
I
0.000
jdp2a
Danio rerio
ENSDARG00000040137
I
0.000
jdp2a
Takifugu rubripes
ENSTRUG00000018323
I
0.000
jdp2a
Oryzias latipes
ENSORLG00000016515
I
0.000
jdp2b
Takifugu rubripes
ENSTRUG00000010344
I
0.000
jdp2b
Oryzias latipes
ENSORLG00000017506
I
0.000
jdp2b
Gasterosteus aculeatus
ENSGACG00000010513
I
0.000
Myotis_brandtii_JDP2_10012947
Myotis brandtii
Myotis_brandtii_JDP2_10012947
I
0.000
Ogr08030
Ophisaurus gracilis
Ogr08030
I
0.000
Pvit_01216
Pogona vitticeps
Pvit_01216
I
0.000
tetur01g16120
Tetranychus urticae
tetur01g16120
I
0.000