CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10008419.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10008419.g
T298227_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.946
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10008419
NAC/NAM
3
128
MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRFDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA26501
Drosophila pseudoobscura
FBgn0247875
I
GD20060
Drosophila simulans
FBgn0191541
I
GE25067
Drosophila yakuba
FBgn0242155
I
GG15412
Drosophila erecta
FBgn0107663
I
GH14167
Drosophila grimshawi
FBgn0121643
I
GI10538
Drosophila mojavensis
FBgn0133302
I
GJ24191
Drosophila virilis
FBgn0211274
I
GK22722
Drosophila willistoni
FBgn0224699
I
GL24086
Drosophila persimilis
FBgn0161676
I
GM23187
Drosophila sechellia
FBgn0178054
I
MDOA006256
Musca domestica
MDOA006256
I
MDOA009503
Musca domestica
MDOA009503
I
Stat92E
Drosophila melanogaster
FBgn0016917
D