MDP0000126517 (Malus domestica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 MDP0000126517 T298385_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.922 0.840
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.922 0.840
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.922 0.840
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000126517 NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Malus domestica TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_kg.C_30200002 Phytophthora capsici estExt_fgenesh1_kg.C_30200002 N
F443_05590 Phytophthora parasitica F443_05590 N
fgenesh_masked-piw_contig_88-abinit-gene-0.43 Pythium iwayamai fgenesh_masked-piw_contig_88-abinit-gene-0.43 N
fgenesh_scip_prom.46568.10829 Phytophthora kernoviae fgenesh_scip_prom.46568.10829 N
HpaG808968 Hyaloperonospora arabidopsidis HpaG808968 N
maker-pag1_scaffold_161-snap-gene-0.10 Pythium aphanidermatum maker-pag1_scaffold_161-snap-gene-0.10 N
maker-par_contig_1598-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1598-fgenesh-gene-0.1 N
maker-pir_contig_219-fgenesh-gene-0.10 Pythium irregulare maker-pir_contig_219-fgenesh-gene-0.10 N
maker-pve_contig_855-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_855-fgenesh-gene-0.1 N
Phyra84742 Phytophthora ramorum Phyra84742 N
PITG_09816 Phytophthora infestans PITG_09816 N
PYU1_G001927 Pythium ultimum PYU1_G001927 N
SPRG_03788 Saprolegnia parasitica SPRG_03788 N