CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MDP0000221977 *(Malus domestica)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	MDP0000221977	T298453_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC037 M07187_2.00	Arabidopsis thaliana	CKTVNDNHNYAMG	CKTRNDNHNBAMG	Dap-seq OMalley et al.(2016) VND1_col_a	0.909	0.832
NAC007 M07164_2.00	Arabidopsis thaliana	TTRCKTVHDNNNYAMG	CKTRNNNHDBAMGYAA	Dap-seq OMalley et al.(2016) VND4_colamp_a	0.904	0.823
NAC007 M07165_2.00	Arabidopsis thaliana	TGCKTVHDNHDYAMG	CKTRHDNHDBAMGCA	Dap-seq OMalley et al.(2016) VND4_col	0.904	0.823
ANAC076 M07224_2.00	Arabidopsis thaliana	TRCKTVHNNHNYAMG	CKTRNDNNDBAMGYA	Dap-seq OMalley et al.(2016) VND2_col_a	0.896	0.814
ANAC076 M07225_2.00	Arabidopsis thaliana	TTGCKTVHNNHNYAMGYHAHNNN	NNNDTDRCKTRNDNNDBAMGCAA	Dap-seq OMalley et al.(2016) VND2_colamp_a	0.896	0.814
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
MDP0000221977	NAC/NAM	29	157	PPGFRFRPTDEELVDYYLRKKIASKLIDFDVIRDVDLYKIEPWDLEDLCKIGSGDQNEWYFFSHKDKKYPTGSRTNRATKAGFWKATGRDKAIYRGEKFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Malus domestica* TFs