Pavir.J00477 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J00477 T298918_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC035
M07186_2.00 		Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG		 Dap-seq
OMalley et al.(2016)
ANAC034_col 		0.917 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00477.1.p NAC/NAM 47 172

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_02722 Trichosporon asahii A1Q1_02722 N
A1Q1_05146 Trichosporon asahii A1Q1_05146 N
CERSUDRAFT_110761 Ceriporiopsis subvermispora CERSUDRAFT_110761 N
estExt_Genewise1Plus.C_10795 Heterobasidion annosum estExt_Genewise1Plus.C_10795 N
FOMPIDRAFT_1035071 Fomitopsis pinicola FOMPIDRAFT_1035071 N
GLOTRDRAFT_68601 Gloeophyllum trabeum GLOTRDRAFT_68601 N
HETIRDRAFT_468737 Heterobasidion irregulare HETIRDRAFT_468737 N
JAAARDRAFT_203058 Jaapia argillacea JAAARDRAFT_203058 N
K437DRAFT_132732 Tilletiaria anomala K437DRAFT_132732 N
M408DRAFT_325789 Serendipita vermifera M408DRAFT_325789 N
PaG_06601 Pseudozyma aphidis PaG_06601 N
PAN0_008d3627 Pseudozyma antarctica PAN0_008d3627 N
PHACADRAFT_247554 Phanerochaete carnosa PHACADRAFT_247554 N
PHLGIDRAFT_83469 Phlebiopsis gigantea PHLGIDRAFT_83469 N
PHSY_000700 Pseudozyma hubeiensis PHSY_000700 N
PIIN_04099 Piriformospora indica PIIN_04099 N
sr13281 Sporisorium reilianum sr13281 N
UM02061 Ustilago maydis UM02061 N