CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J07259
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J07259
T298946_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J07259.1.p
NAC/NAM
7
133
PPGFRFHPTDVELVSYYLKRKIMGKKLIVDAISEVDLYKFPPWDLPDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIILNSRIVGMKKTLIFHEGKAPKGDRTDWVMYEYKM
Pavir.J07259.2.p
NAC/NAM
7
133
PPGFRFHPTDVELVSYYLKRKIMGKKLIVDAISEVDLYKFPPWDLPDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIILNSRIVGMKKTLIFHEGKAPKGDRTDWVMYEYKM
Pavir.J07259.3.p
NAC/NAM
7
133
PPGFRFHPTDVELVSYYLKRKIMGKKLIVDAISEVDLYKFPPWDLPDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIILNSRIVGMKKTLIFHEGKAPKGDRTDWVMYEYKM
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10012675
Chelonia mydas
Cmyd_10012675
N
ENSACAG00000013594
Anolis carolinensis
ENSACAG00000013594
I
ENSMGAG00000017035
Meleagris gallopavo
ENSMGAG00000017035
N
Ogr11577
Ophisaurus gracilis
Ogr11577
N
PGR
Callithrix jacchus
ENSCJAG00000000583
I
PGR
Homo sapiens
ENSG00000082175
D
PGR
Macaca mulatta
ENSMMUG00000011846
I